RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ZNF879B4DU55 563 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 CASKO14936 926 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 ARL6IP5O75915 188 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 IL1AP01583 271 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 ANXA2P07355 339 aaKnown RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 UBCP0CG48 685 aaKnown RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 SLC2A1P11166 492 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 CD79AP11912 226 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 IGHV1-2P23083 117 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 MYL9P24844 172 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 MAPK3P27361 379 aaPredicted RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 SOX6P35712 828 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 Q499Y3 187 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 HIKESHIQ53FT3 197 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 ZNF704Q6ZNC4 412 aaPredicted RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 WNT5BQ9H1J7 359 aa19.19■□□□□ 0.66
LINC01960-201ENST00000563759 CCDC59Q9P031 241 aaKnown RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 NUFIP1Q9UHK0 495 aaKnown RBP19.19■□□□□ 0.66
LINC01960-201ENST00000563759 A0A1W2PPK0 400 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 CIB4A0PJX0 185 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 ACOD1A6NK06 481 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 M0R135 149 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 RAD51DO75771 328 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 LYZL6O75951 148 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 APOC1P02654 83 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 GLI4P10075 376 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 RPS19P39019 145 aaKnown RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 PABPC1L2AQ5JQF8 200 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 OR51A4Q8NGJ6 313 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 OR10AC1Q8NH08 325 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 NANOS1Q8WY41 292 aaKnown RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 ZNF799Q96GE5 643 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 OPN3Q9H1Y3 402 aaPredicted RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 PPIL3Q9H2H8 161 aaKnown RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 OR6C6A6NF89 314 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 DBHP09172 617 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 CTSSP25774 331 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 OTX1P32242 354 aaPredicted RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 SOX2P48431 317 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 LUZP2Q86TE4 346 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 BCL2L2Q92843 193 aaPredicted RBP19.18■□□□□ 0.66
LINC01960-201ENST00000563759 MED18Q9BUE0 208 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 SFXN3Q9BWM7 321 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 SLC24A3Q9HC58 644 aa19.18■□□□□ 0.66
LINC01960-201ENST00000563759 LOC107986453A0A1B0GWG9 222 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 UBL3O95164 117 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 TTRP02766 147 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 CEACAM8P31997 349 aaPredicted RBP19.17■□□□□ 0.66
LINC01960-201ENST00000563759 TBRG1Q3YBR2 411 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 HSD17B12Q53GQ0 312 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 SFRP5Q5T4F7 317 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 TMEM53Q6P2H8 277 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 FAM57BQ71RH2 274 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 ELMOD2Q8IZ81 293 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 ZNF610Q8N9Z0 462 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 PHYHIPQ92561 330 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 THRSPQ92748 146 aa19.17■□□□□ 0.66
LINC01960-201ENST00000563759 TRBV5-5A0A0J9YX44 114 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 SMIM30A4D0T7 59 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 CGAP01215 116 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 ISG15P05161 165 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 UCHL1P09936 223 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 COX5AP20674 150 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 CRYGSP22914 178 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 ARR3P36575 388 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 MAGEB1P43366 347 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 MTNR1BP49286 362 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 TPTEP56180 551 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 PMPCAQ10713 525 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 TMEM244Q5VVB8 128 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 DPPA2Q7Z7J5 298 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 COMMD2Q86X83 199 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 GABRG1Q8N1C3 465 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 DERL3Q96Q80 235 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 SLIRPQ9GZT3 109 aaKnown RBP19.16■□□□□ 0.66
LINC01960-201ENST00000563759 NOX4Q9NPH5 578 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 HHLA2Q9UM44 414 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 PCNX1Q96RV3 2341 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 COL6A6A6NMZ7 2263 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 SHISA3A0PJX4 238 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 ZNF503-AS2A6NEH8 195 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 P2RY10O00398 339 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 CLPXO76031 633 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 CLEC2LP0C7M8 214 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 ACHEP22303 614 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 RAB1AP62820 205 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 BEND4Q6ZU67 534 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 ZNF433Q8N7K0 673 aaPredicted RBP19.16■□□□□ 0.66
LINC01960-201ENST00000563759 OR8B12Q8NGG6 310 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 TMEM106AQ96A25 262 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 PGAM5Q96HS1 289 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 DHDHQ9UQ10 334 aa19.16■□□□□ 0.66
LINC01960-201ENST00000563759 USP24Q9UPU5 2620 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 ACSM4P0C7M7 580 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 HOXC12P31275 282 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 RORCP51449 518 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 HNRNPA0Q13151 305 aaKnown RBP19.15■□□□□ 0.66
LINC01960-201ENST00000563759 GSG1Q2KHT4 349 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 GFOD2Q3B7J2 385 aa19.15■□□□□ 0.66
LINC01960-201ENST00000563759 DRAM2Q6UX65 266 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms