RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TAS2R41P59536 307 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 RAB8AP61006 207 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ARF3P61204 181 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 ARF1P84077 181 aaKnown RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 EMX1Q04741 257 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 STX4Q12846 297 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SCGB2A2Q13296 93 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PMS2P3Q13401 168 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TMED1Q13445 227 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C1DQ13901 141 aaKnown RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 SERTAD2Q14140 314 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PTGES3Q15185 160 aaKnown RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 NSDHLQ15738 373 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 DECR1Q16698 335 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 DUSP7Q16829 419 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 EXOC3L2Q2M3D2 409 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C2orf68Q2NKX9 166 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ARHGAP11BQ3KRB8 267 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 DEFB134Q4QY38 66 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 GPAT3Q53EU6 434 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF311Q5JNZ3 666 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 FGD3Q5JSP0 725 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ARMC4Q5T2S8 1044 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 CASC10Q5T4H9 136 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 UBE2UQ5VVX9 321 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 GPR107Q5VW38 600 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SLX4IPQ5VYV7 408 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 XAF1Q6GPH4 301 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ASPHD2Q6ICH7 369 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF770Q6IQ21 691 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 MFSD12Q6NUT3 480 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C1orf94Q6P1W5 598 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TNFAIP8L2Q6P589 184 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 C17orf107Q6ZR85 190 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SZRD1Q7Z422 152 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PXKQ7Z7A4 578 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TMEM179BQ7Z7N9 219 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 RANBP3LQ86VV4 465 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 P2RY8Q86VZ1 359 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 EGFL6Q8IUX8 553 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF595Q8IYB9 648 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF440Q8IYI8 595 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C10orf111Q8N326 155 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 OR2L13Q8N349 312 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 STX19Q8N4C7 294 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 KIR3DL3Q8N743 410 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PRR26Q8N8Z3 221 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SMYD1Q8NB12 490 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 AQP11Q8NBQ7 271 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SCCPDHQ8NBX0 429 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PROKR2Q8NFJ6 384 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 KBTBD8Q8NFY9 601 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 OR5AK3PQ8NH89 298 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 NEIL3Q8TAT5 605 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PIGXQ8TBF5 258 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF675Q8TD23 568 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 GNPDA2Q8TDQ7 276 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SGCDQ92629 289 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C12orf43Q96C57 262 aaKnown RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 CNRIP1Q96F85 164 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 VMP1Q96GC9 406 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 C10orf90Q96M02 699 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PRRC1Q96M27 445 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ZNF285Q96NJ3 590 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 FOXN4Q96NZ1 517 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 COQ7Q99807 217 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 FAM173AQ9BQD7 235 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TMEM204Q9BSN7 226 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TRAF4Q9BUZ4 470 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 SFXN3Q9BWM7 321 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 CACNG6Q9BXT2 260 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ITPAQ9BY32 194 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 NDEL1Q9GZM8 345 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 OPN3Q9H1Y3 402 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 SPNS1Q9H2V7 528 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 OR51I1Q9H343 314 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PIGMQ9H3S5 423 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 CALHM2Q9HA72 323 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 SCPEP1Q9HB40 452 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TMEM27Q9HBJ8 222 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ADAP2Q9NPF8 381 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ACOT13Q9NPJ3 140 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 HPF1Q9NWY4 346 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TEX10Q9NXF1 929 aaPredicted RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 SELENONQ9NZV5 590 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 PSORS1C1Q9UIG5 152 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 ENPP5Q9UJA9 477 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 MRTO4Q9UKD2 239 aaKnown RBP2.76□□□□□ -1.97
SPG11-225ENST00000561391 FBXW2Q9UKT8 454 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.76□□□□□ -1.97
SPG11-225ENST00000561391 BAIAP2Q9UQB8 552 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 TMEM5Q9Y2B1 443 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 WDR45Q9Y484 360 aa2.76□□□□□ -1.97
SPG11-225ENST00000561391 DSPPQ9NZW4 1301 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ARPC4-TTLL3A0A0A6YYG9 625 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 ISPDA4D126 451 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 TRAPPC13A5PLN9 417 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 GLOD5A6NK44 160 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 CLDN25C9JDP6 229 aa2.75□□□□□ -1.97
SPG11-225ENST00000561391 H3BN98 237 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms