RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LSM6P62312 80 aaKnown RBP14.48□□□□□ -0.09
TPM1-219ENST00000559397 HNRNPA0Q13151 305 aaKnown RBP14.48□□□□□ -0.09
TPM1-219ENST00000559397 STK11Q15831 433 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 CEACAM16Q2WEN9 425 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 FAM27D1Q5T7N8 215 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 PRSS35Q8N3Z0 413 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 C6orf62Q9GZU0 229 aaPredicted RBP14.48□□□□□ -0.09
TPM1-219ENST00000559397 EMC7Q9NPA0 242 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 CRNNQ9UBG3 495 aaPredicted RBP14.48□□□□□ -0.09
TPM1-219ENST00000559397 LRP12Q9Y561 859 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 PEX16Q9Y5Y5 336 aa14.48□□□□□ -0.09
TPM1-219ENST00000559397 TRAV1-2A0A0B4J238 106 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 TMEM212A6NML5 194 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 J3QKU1 62 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 CALRP27797 417 aaKnown RBP14.47□□□□□ -0.09
TPM1-219ENST00000559397 MPGP29372 298 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 KIR3DL2P43630 455 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 SRSF1Q07955 248 aaKnown RBP eCLIP14.47□□□□□ -0.094e-10■■■□□ 14.7
TPM1-219ENST00000559397 ZNF846Q147U1 533 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 CORO6Q6QEF8 472 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 RHOUQ7L0Q8 258 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 ABHD12BQ7Z5M8 362 aaPredicted RBP14.47□□□□□ -0.09
TPM1-219ENST00000559397 OR5AK2Q8NH90 309 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 BORCS5Q969J3 196 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 RBM24Q9BX46 236 aaKnown RBP14.47□□□□□ -0.09
TPM1-219ENST00000559397 C1orf198Q9H425 327 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 HMG20AQ9NP66 347 aa14.47□□□□□ -0.09
TPM1-219ENST00000559397 TRBV5-5A0A0J9YX44 114 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 PNPP00491 289 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 DCTDP32321 178 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 WDR38Q5JTN6 314 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 OR7E24Q6IFN5 339 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 XKRXQ6PP77 449 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 TPRA1Q86W33 373 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 ZNF808Q8N4W9 903 aaPredicted RBP14.46□□□□□ -0.09
TPM1-219ENST00000559397 IL17RDQ8NFM7 739 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 OR10S1Q8NGN2 331 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 CA5BP1Q8WTZ4 195 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 NABP1Q96AH0 204 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 SLAMF6Q96DU3 332 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 KCNS3Q9BQ31 491 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 WDR12Q9GZL7 423 aaKnown RBP14.46□□□□□ -0.09
TPM1-219ENST00000559397 SMURF1Q9HCE7 757 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 GDF2Q9UK05 429 aaPredicted RBP14.46□□□□□ -0.09
TPM1-219ENST00000559397 R4GMQ9 66 aa14.46□□□□□ -0.09
TPM1-219ENST00000559397 FLNCQ14315 2725 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ARPC4-TTLL3A0A0A6YYG9 625 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 WIPF3A6NGB9 483 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 FAM90A27PA6NNH2 459 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ZNF879B4DU55 563 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 CTDSP2O14595 271 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ARL6IP5O75915 188 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 MSR1P21757 451 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ETV6P41212 452 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ASCL1P50553 236 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 P2RY6Q15077 328 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 FBXL19-AS1Q494R0 122 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 C9orf135Q5VTT2 229 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 CFAP77Q6ZQR2 320 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 SPATC1Q76KD6 591 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 CXorf67Q86X51 503 aaPredicted RBP14.46□□□□□ -0.1
TPM1-219ENST00000559397 CATSPERDQ86XM0 798 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ZNF433Q8N7K0 673 aaPredicted RBP14.46□□□□□ -0.1
TPM1-219ENST00000559397 OR14A2Q96R54 314 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 NELFAQ9H3P2 528 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 ELOVL5Q9NYP7 299 aa14.46□□□□□ -0.1
TPM1-219ENST00000559397 PIN1P1O15428 100 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 MYL9P24844 172 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 S100A5P33763 92 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 ZNF84P51523 738 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 CAV3P56539 151 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 MRPS34P82930 218 aaKnown RBP14.45□□□□□ -0.1
TPM1-219ENST00000559397 ARF1P84077 181 aaKnown RBP14.45□□□□□ -0.1
TPM1-219ENST00000559397 MFGE8Q08431 387 aaPredicted RBP14.45□□□□□ -0.1
TPM1-219ENST00000559397 ENDOGQ14249 297 aaKnown RBP14.45□□□□□ -0.1
TPM1-219ENST00000559397 SFRP5Q5T4F7 317 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 ZNF544Q6NX49 715 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 STAC2Q6ZMT1 411 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 ZNF627Q7L945 461 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 NR2C2APQ86WQ0 139 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 DERL3Q96Q80 235 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 FOXB1Q99853 325 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 COMMD4Q9H0A8 199 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 PNRC2Q9NPJ4 139 aaKnown RBP14.45□□□□□ -0.1
TPM1-219ENST00000559397 TMEM38BQ9NVV0 291 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 FBXL3Q9UKT7 428 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 MYO18BQ8IUG5 2567 aa14.45□□□□□ -0.1
TPM1-219ENST00000559397 CLEC18AA5D8T8 446 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 NKX2-6A6NCS4 301 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 LYZL6O75951 148 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 CLDN14O95500 239 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 H2BFMP0C1H6 154 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 RNF224P0DH78 156 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 PSMB1P20618 241 aaKnown RBP14.44□□□□□ -0.1
TPM1-219ENST00000559397 GUCA1AP43080 201 aaPredicted RBP14.44□□□□□ -0.1
TPM1-219ENST00000559397 MMP16P51512 607 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 HIST1H3AP68431 136 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 TFF3Q07654 80 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 FAM27E3Q08E93 113 aa14.44□□□□□ -0.1
TPM1-219ENST00000559397 TSC22D1Q15714 1073 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms