RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 C19orf18Q8NEA5 215 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 OR8J3Q8NGG0 315 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 SSMEM1Q8WWF3 244 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF583Q96ND8 569 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 RERGLQ9H628 205 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 TMEM100Q9NV29 134 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 KIF17Q9P2E2 1029 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 ATPIF1Q9UII2 106 aa13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 COA3Q9Y2R0 106 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 TET2Q6N021 2002 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPB-205ENST00000559245 CENPVL3A0A0U1RRI6 287 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 A0A1B0GWJ7 208 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF879B4DU55 563 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 FXYD1O00168 92 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 CDC42EP2O14613 210 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 SLC16A7O60669 478 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 KHDRBS3O75525 346 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 HLA-DPB1P04440 258 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 FPR3P25089 353 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 KDELR2P33947 212 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 PSMB10P40306 273 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 GATA4P43694 442 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 GPR4P46093 362 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 MAB21L1Q13394 359 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 TAF9Q16594 264 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 C1QL4Q86Z23 238 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 GLB1L2Q8IW92 636 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 RNF113BQ8IZP6 322 aaKnown RBP13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 LINC01006Q8NI28 216 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 TBC1D15Q8TC07 691 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 DYRK2Q92630 601 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 TECTBQ96PL2 329 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 TBX15Q96SF7 602 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 FNDC11Q9BVV2 318 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 SYT4Q9H2B2 425 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 WDR76Q9H967 626 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 TMCC3Q9ULS5 477 aa13.49□□□□□ -0.25
CDC42BPB-205ENST00000559245 A0A087WUU8 490 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 SLC22A31A6NKX4 558 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 J3KTA2 159 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 CLPXO76031 633 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 TOX4O94842 621 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 MMP9P14780 707 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF26P17031 533 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 NPY4RP50391 375 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 SELENOWP63302 87 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 KRR1Q13601 381 aaKnown RBP13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZBED5Q49AG3 693 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 CD276Q5ZPR3 534 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ZNF730Q6ZMV8 503 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 OR11L1Q8NGX0 322 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 Q8TCH9 128 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ACOT11Q8WXI4 607 aaPredicted RBP13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 GATAD2BQ8WXI9 593 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ERGIC1Q969X5 290 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 COQ7Q99807 217 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 ACOXLQ9NUZ1 547 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 FAM53CQ9NYF3 392 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 POLR1DQ9Y2S0 133 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 SNX13Q9Y5W8 968 aa13.48□□□□□ -0.25
CDC42BPB-205ENST00000559245 IMPA2O14732 288 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 FFAR1O14842 300 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 PLXNB1O43157 2135 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 GPR137BO60478 399 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 FAM20BO75063 409 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 TSPAN15O95858 294 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 LIPFP07098 398 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 PRSS12P56730 875 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 PROK1P58294 105 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 CLEC12AQ5QGZ9 265 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 PRAMEF6Q5VXH4 476 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 TBPL2Q6SJ96 375 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 TMPRSS11FQ6ZWK6 438 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 MBOAT2Q6ZWT7 520 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 GJC3Q8NFK1 279 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 LZICQ8WZA0 190 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 WDFY2Q96P53 400 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 TRIM15Q9C019 465 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 NDEL1Q9GZM8 345 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 HDHD2Q9H0R4 259 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 MMADHCQ9H3L0 296 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 NMNAT1Q9HAN9 279 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 TCF7L1Q9HCS4 588 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 MED4Q9NPJ6 270 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 UFSP2Q9NUQ7 469 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 VSX1Q9NZR4 365 aaPredicted RBP13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 ERVK-18Q9QC07 812 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 CTSZQ9UBR2 303 aa13.47□□□□□ -0.25
CDC42BPB-205ENST00000559245 FAM220BPB1ANY3 271 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 NPPAP01160 153 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 IGHV4-59P01825 116 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 IFNW1P05000 195 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 SDHAP31040 664 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 CD200P41217 278 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 RAD23AP54725 363 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 HIST1H3AP68431 136 aa13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 HOXA4Q00056 320 aaPredicted RBP13.46□□□□□ -0.25
CDC42BPB-205ENST00000559245 MPPED2Q15777 294 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms