RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 PRSS12P56730 875 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 MOGQ16653 247 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 PCK2Q16822 640 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 RSPO1Q2MKA7 263 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 SLC35D3Q5M8T2 416 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 LCN1P1Q5VSP4 162 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 DNM1P46Q6ZS02 220 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 TMEM163Q8TC26 289 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 ST7LQ8TDW4 575 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 NEU4Q8WWR8 484 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 CMBLQ96DG6 245 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 COG8Q96MW5 612 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 SMR3AQ99954 134 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 C9orf16Q9BUW7 83 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 ABHD6Q9BV23 337 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 MARCH7Q9H992 704 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 USE1Q9NZ43 259 aa13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 H2AFY2Q9P0M6 372 aaPredicted RBP13.55□□□□□ -0.24
RABGGTA-206ENST00000558649 VPS13CQ709C8 3753 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 CCDC182A6NF36 153 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 C17orf100A8MU93 164 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 LYNX1G3V0Z9 82 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 H3BSA7 217 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 TPD52L2O43399 206 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 SPRY3O43610 288 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 CSF3P09919 207 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 LYNX1P0DP58 116 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 HSD11B1P28845 292 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 ZNF81P51508 661 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 PRKXP51817 358 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 RAD23AP54725 363 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 DSCR9P59020 149 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 CCL8P80075 99 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 PSG7Q13046 419 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 TSTQ16762 297 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 KRTAP27-1Q3LI81 207 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 SHFQ7M4L6 423 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 OR5AS1Q8N127 324 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 ZNF283Q8N7M2 679 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 FAM81AQ8TBF8 368 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 EME1Q96AY2 570 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 COX4I2Q96KJ9 171 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 AMELYQ99218 206 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 MSL2Q9HCI7 577 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 RTTNQ86VV8 2226 aa13.54□□□□□ -0.24
RABGGTA-206ENST00000558649 MAP1AP78559 2803 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 NCR1O76036 304 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 HPXP02790 462 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 LYNP07948 512 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 SLC2A1P11166 492 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 HCCSP53701 268 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 CDC42P60953 191 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 RCN1Q15293 331 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 ZBTB49Q6ZSB9 765 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 UBASH3BQ8TF42 649 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 TEAD3Q99594 435 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 PIMREGQ9BSJ6 248 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 TTTY10Q9BZA0 68 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 GSX1Q9H4S2 264 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 MYOZ1Q9NP98 299 aaPredicted RBP13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 IMPAD1Q9NX62 359 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 DNAJC27Q9NZQ0 273 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 PURGQ9UJV8 347 aaKnown RBP13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 KLHDC2Q9Y2U9 406 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 MED13LQ71F56 2210 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 HIVEP1P15822 2718 aa13.53□□□□□ -0.24
RABGGTA-206ENST00000558649 F8P00451 2351 aa13.52□□□□□ -0.24
RABGGTA-206ENST00000558649 J3QW42 95 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 H2BFMP0C1H6 154 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 FOSL1P15407 271 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 TUBG1P23258 451 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 ANOS1P23352 680 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC15A1P46059 708 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 CX3CR1P49238 355 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 MMP15P51511 669 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 GRB2P62993 217 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 MALLQ13021 153 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 SNAI3Q3KNW1 292 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 NXNL2Q5VZ03 156 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 OR2T2Q6IF00 324 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 MEPCEQ7L2J0 689 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC16A9Q7RTY1 509 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 BHLHE23Q8NDY6 225 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 RNF133Q8WVZ7 376 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 MBOAT4Q96T53 435 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 CNN2Q99439 309 aaKnown RBP13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 SLC29A1Q99808 456 aa13.52□□□□□ -0.25
RABGGTA-206ENST00000558649 TOR3AQ9H497 397 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms