RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 J3QW42 95 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 BHLHE40O14503 412 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 SURF4O15260 269 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 IDH3BO43837 385 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 SOX14O95416 240 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 AVPP01185 164 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 GASTP01350 101 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 IGHV2-70P01814 119 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 ZNF823P16415 610 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 GGT2P36268 569 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 DCAF12L2Q5VW00 463 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
HERC1-202ENST00000558324 LCN8Q6JVE9 175 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 RPL13AP3Q6NVV1 102 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 LYPD4Q6UWN0 246 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 FBXW12Q6X9E4 464 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 C1orf229Q6ZS94 237 aaPredicted RBP10.06□□□□□ -0.8
HERC1-202ENST00000558324 OR9Q1Q8NGQ5 310 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 ST7LQ8TDW4 575 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 CLPTM1LQ96KA5 538 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 ZNF582Q96NG8 517 aaPredicted RBP10.06□□□□□ -0.8
HERC1-202ENST00000558324 TMPRSS13Q9BYE2 586 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
HERC1-202ENST00000558324 IL19Q9UHD0 177 aa10.06□□□□□ -0.8
HERC1-202ENST00000558324 SAMHD1Q9Y3Z3 626 aaKnown RBP10.06□□□□□ -0.8
HERC1-202ENST00000558324 TANC2Q9HCD6 1990 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 H0YL77 283 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 ZNF205O95201 554 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 FAM107AO95990 144 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 LCATP04180 440 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 ACSM4P0C7M7 580 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 CALB2P22676 271 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MAGEA2P43356 314 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MMP16P51512 607 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 HMGA2P52926 109 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 BTG1P62324 171 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MS4A2Q01362 244 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 TRAP1Q12931 704 aaKnown RBP10.05□□□□□ -0.8
HERC1-202ENST00000558324 ZMYND11Q15326 602 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 RSPO1Q2MKA7 263 aaPredicted RBP10.05□□□□□ -0.8
HERC1-202ENST00000558324 FAM98BQ52LJ0 330 aaKnown RBP10.05□□□□□ -0.8
HERC1-202ENST00000558324 NAA40Q86UY6 237 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 KLHL36Q8N4N3 616 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 LINC00471Q8N535 108 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 SPICQ8N5J4 248 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 ZNF283Q8N7M2 679 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 SLC37A3Q8NCC5 494 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 OR8G5Q8NG78 346 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 OR13G1Q8NGZ3 307 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 OR2T4Q8NH00 348 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 ZNF420Q8TAQ5 688 aaPredicted RBP10.05□□□□□ -0.8
HERC1-202ENST00000558324 ZNRF4Q8WWF5 429 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MAP6Q96JE9 813 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 LRGUKQ96M69 825 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 SIGLEC11Q96RL6 698 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 TSSK6Q9BXA6 273 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 HCAR1Q9BXC0 346 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 TRIM15Q9C019 465 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MUC13Q9H3R2 512 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 MAGIXQ9H6Y5 334 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 REEP1Q9H902 201 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 PNRC2Q9NPJ4 139 aaKnown RBP10.05□□□□□ -0.8
HERC1-202ENST00000558324 ARMC1Q9NVT9 282 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 CYB5R1Q9UHQ9 305 aa10.05□□□□□ -0.8
HERC1-202ENST00000558324 IQCF6A8MYZ5 107 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 F5H5P2 479 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 MLNRO43193 412 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 VENTXO95231 258 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 CYB5R3P00387 301 aaPredicted RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 HLA-DPB1P04440 258 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 GYPBP06028 91 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 SPARCP09486 303 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 PSKH1P11801 424 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 SELEP16581 610 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 EPHA1P21709 976 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 ZFP36P26651 326 aaKnown RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 SLC6A9P48067 706 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 SEC61A1P61619 476 aaKnown RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 ECH1Q13011 328 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 CRMP1Q14194 572 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 TRIM25Q14258 630 aaKnown RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 GK2Q14410 553 aaPredicted RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 OR2T5Q6IEZ7 315 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 RASSF6Q6ZTQ3 369 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 MOGAT3Q86VF5 341 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 ARHGAP24Q8N264 748 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.04□□□□□ -0.8
HERC1-202ENST00000558324 OR2T29Q8NH02 315 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 OR4Q3Q8NH05 313 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 SLCO4A1Q96BD0 722 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 MEGF10Q96KG7 1140 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 C1QTNF5Q9BXJ0 243 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 C7orf69Q9H7B7 122 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 GCM1Q9NP62 436 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 IL20Q9NYY1 176 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 COMMD3-BMI1R4GMX3 469 aa10.04□□□□□ -0.8
HERC1-202ENST00000558324 TMEM178BH3BS89 294 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 J3QLI3 93 aa10.03□□□□□ -0.8
HERC1-202ENST00000558324 M0R135 149 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms