RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MFGE8Q08431 387 aaPredicted RBP14.69□□□□□ -0.06
SNX1-203ENST00000558040 FAM27E3Q08E93 113 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 BCL2L15Q5TBC7 163 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 GPR107Q5VW38 600 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 DRAM2Q6UX65 266 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 CATSPERDQ86XM0 798 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 CLVS1Q8IUQ0 354 aaPredicted RBP14.69□□□□□ -0.06
SNX1-203ENST00000558040 WDR31Q8NA23 367 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 OR5AK2Q8NH90 309 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 RPS4Y2Q8TD47 263 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 HSD17B8Q92506 261 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 S100PBPQ96BU1 408 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 MUCL1Q96DR8 90 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 DCLRE1CQ96SD1 692 aaKnown RBP14.69□□□□□ -0.06
SNX1-203ENST00000558040 FUNDC2Q9BWH2 189 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 FAM206AQ9NX38 181 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 FRRS1LQ9P0K9 344 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 OR52A1Q9UKL2 312 aa14.69□□□□□ -0.06
SNX1-203ENST00000558040 SIRT4Q9Y6E7 314 aaPredicted RBP14.69□□□□□ -0.06
SNX1-203ENST00000558040 NCOA6Q14686 2063 aaPredicted RBP14.69□□□□□ -0.06
SNX1-203ENST00000558040 A0A1W2PR80 420 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 CCDC160A6NGH7 325 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 FAM90A27PA6NNH2 459 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 PNPP00491 289 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 SERPINA5P05154 406 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 ANXA2P07355 339 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 STOMP27105 288 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 APEX1P27695 318 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 ZNF121P58317 390 aaPredicted RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 NANOS3P60323 173 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 KRTAP27-1Q3LI81 207 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 FBXL19-AS1Q494R0 122 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 WDR38Q5JTN6 314 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 ANKRD13BQ86YJ7 626 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 MS4A15Q8N5U1 240 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 ZNF676Q8N7Q3 588 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 FAM169BQ8N8A8 192 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 CPEB3Q8NE35 698 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 OR1J2Q8NGS2 313 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 GHSRQ92847 366 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 RNF166Q96A37 237 aaPredicted RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 FAM192AQ9GZU8 254 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 BRD7Q9NPI1 651 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 NUFIP1Q9UHK0 495 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 SLC25A15Q9Y619 301 aa14.68□□□□□ -0.06
SNX1-203ENST00000558040 PRRC2CQ9Y520 2896 aaKnown RBP14.68□□□□□ -0.06
SNX1-203ENST00000558040 A6NHS1 94 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 OR4C45A6NMZ5 311 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 SERPINA3P01011 423 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 HLA-DPB1P04440 258 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 DBHP09172 617 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 ACSM4P0C7M7 580 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 UBCP0CG48 685 aaKnown RBP14.67□□□□□ -0.06
SNX1-203ENST00000558040 PPP3CBP16298 524 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 AGAP20933 346 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 TMBIM6P55061 237 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 RPS25P62851 125 aaKnown RBP14.67□□□□□ -0.06
SNX1-203ENST00000558040 PPA1Q15181 289 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 TBC1D28Q2M2D7 210 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 ZNF704Q6ZNC4 412 aaPredicted RBP14.67□□□□□ -0.06
SNX1-203ENST00000558040 PRSS35Q8N3Z0 413 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 IL17RDQ8NFM7 739 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 ZNF420Q8TAQ5 688 aaPredicted RBP14.67□□□□□ -0.06
SNX1-203ENST00000558040 RAB2BQ8WUD1 216 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 SLC7A6Q92536 515 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 RNASE6Q93091 150 aaKnown RBP14.67□□□□□ -0.06
SNX1-203ENST00000558040 PGAM5Q96HS1 289 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 PGLYRP3Q96LB9 341 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 TMED9Q9BVK6 235 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 PBOV1Q9GZY1 135 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 KCNJ16Q9NPI9 418 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 G6PC2Q9NQR9 355 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 ENPP5Q9UJA9 477 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 STUB1Q9UNE7 303 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 ZNF281Q9Y2X9 895 aa14.67□□□□□ -0.06
SNX1-203ENST00000558040 RP1L1Q8IWN7 2480 aaPredicted RBP14.66□□□□□ -0.06
SNX1-203ENST00000558040 C5orf49A4QMS7 147 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 H3BSA7 217 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 AIREO43918 545 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 ZFPL1O95159 310 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 IGKV3-15P01624 115 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 ZNF14P17017 642 aaPredicted RBP14.66□□□□□ -0.06
SNX1-203ENST00000558040 GALP22466 123 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 GADD45AP24522 165 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 CCKARP32238 428 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 KIR3DL2P43630 455 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 IDH3GP51553 393 aaPredicted RBP14.66□□□□□ -0.06
SNX1-203ENST00000558040 RSPO1Q2MKA7 263 aaPredicted RBP14.66□□□□□ -0.06
SNX1-203ENST00000558040 C3orf36Q3SXR2 165 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 YIF1BQ5BJH7 314 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 XKRXQ6PP77 449 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 FAM57BQ71RH2 274 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 ZNF584Q8IVC4 421 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 ELMOD2Q8IZ81 293 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 SLC30A7Q8NEW0 376 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 OR52H1Q8NGJ2 320 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 TMEM203Q969S6 136 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 POM121L2Q96KW2 1035 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 ZNF75AQ96N20 296 aa14.66□□□□□ -0.06
SNX1-203ENST00000558040 PDCD1LG2Q9BQ51 273 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms