RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 METTL11BQ5VVY1 283 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 LYPD2Q6UXB3 125 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 ZNF841Q6ZN19 808 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 CELF2-AS1Q8N7Q2 184 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 PNLDC1Q8NA58 520 aaKnown RBP11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 FAM156AQ8NDB6 213 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 OR8J3Q8NGG0 315 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 LINC01006Q8NI28 216 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 Q8TCH9 128 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 TPD52L3Q96J77 140 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 FNDC11Q9BVV2 318 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 MMADHCQ9H3L0 296 aaPredicted RBP11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 RERGLQ9H628 205 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 ERVK-18Q9QC07 812 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 A4GNTQ9UNA3 340 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 POLR1DQ9Y2S0 133 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 ADAM18Q9Y3Q7 739 aa11.79□□□□□ -0.52
CHMP1A-210ENST00000551981 CENPVL3A0A0U1RRI6 287 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 SLC16A7O60669 478 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 KHDRBS3O75525 346 aaKnown RBP11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 DBHP09172 617 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 PSMB10P40306 273 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 PMELP40967 661 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 FHL1Q13642 323 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 C2orf68Q2NKX9 166 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 CCDC92Q53HC0 331 aaPredicted RBP11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 MESTQ5EB52 335 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 C1QL4Q86Z23 238 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 RNF113BQ8IZP6 322 aaKnown RBP11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 OFCC1Q8IZS5 231 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 Q96M85 177 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 TBX15Q96SF7 602 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 COQ7Q99807 217 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 HDHD2Q9H0R4 259 aa11.78□□□□□ -0.52
CHMP1A-210ENST00000551981 IGHV1-69DA0A0B4J2H0 117 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 A0A1B0GWJ7 208 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 RER1O15258 196 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 IGHV1-69P01742 117 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 HLA-DPB1P04440 258 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 PROK1P58294 105 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 SELENOWP63302 87 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 KRR1Q13601 381 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 ZBED5Q49AG3 693 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 AGBL2Q5U5Z8 902 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 PGM2L1Q6PCE3 622 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 ZNF730Q6ZMV8 503 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 GDPGP1Q6ZNW5 385 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 SCCPDHQ8NBX0 429 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 GJC3Q8NFK1 279 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM110DQ8TAY7 271 aaPredicted RBP11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 LRTOMTQ8WZ04 291 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 WDFY2Q96P53 400 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 SYT4Q9H2B2 425 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 TRIM36Q9NQ86 728 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 RHCGQ9UBD6 479 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 TMCC3Q9ULS5 477 aa11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 COA3Q9Y2R0 106 aaPredicted RBP11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 NOP16Q9Y3C1 178 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-210ENST00000551981 ELOVL7A1L3X0 281 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM20BO75063 409 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 TSPAN15O95858 294 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 NPPAP01160 153 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 IGHV4-59P01825 116 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 IFNW1P05000 195 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 MMP9P14780 707 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 KDELR2P33947 212 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 CD200P41217 278 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 GPR4P46093 362 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 YAP1P46937 504 aaKnown RBP11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 MALLQ13021 153 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 MAB21L1Q13394 359 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 OTPQ5XKR4 325 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 GPR139Q6DWJ6 353 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 MBOAT2Q6ZWT7 520 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 RRM2BQ7LG56 351 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM122BQ7Z309 247 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 LDLRAD3Q86YD5 345 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 C19orf18Q8NEA5 215 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 ACOT11Q8WXI4 607 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 LHX4Q969G2 390 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 ZNF583Q96ND8 569 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 DPAGT1Q9H3H5 408 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 WDR76Q9H967 626 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 FN3KRPQ9HA64 309 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 NMNAT1Q9HAN9 279 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 UFSP2Q9NUQ7 469 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 VSX1Q9NZR4 365 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
CHMP1A-210ENST00000551981 FAM220BPB1ANY3 271 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 CDC42EP2O14613 210 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 NDUFA2O43678 99 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 SDHAP31040 664 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 IER3P46695 156 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 RAD23AP54725 363 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 KCNMB1Q16558 191 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 FBLN7Q53RD9 439 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 COQ5Q5HYK3 327 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 CLEC12AQ5QGZ9 265 aa11.75□□□□□ -0.53
CHMP1A-210ENST00000551981 BEND6Q5SZJ8 279 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms