RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 RBP7Q96R05 134 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DIRC2Q96SL1 478 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 SSBP3Q9BWW4 388 aaPredicted RBP5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 CHIAQ9BZP6 476 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PCDHAC1Q9H158 963 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 C1orf198Q9H425 327 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FN3KQ9H479 309 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 PPP1R3EQ9H7J1 279 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF696Q9H7X3 374 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 POLE4Q9NR33 117 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 ASH2LQ9UBL3 628 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 DUX4Q9UBX2 424 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 FBXL3Q9UKT7 428 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 TMCC3Q9ULS5 477 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 CORO2BQ9UQ03 480 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 MED31Q9Y3C7 131 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 GMEB1Q9Y692 573 aa5.7□□□□□ -1.5
PRPF40B-214ENST00000551320 IGHV3OR15-7A0A075B7D8 119 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 A0A087WUU8 490 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 EFCAB9A8MZ26 197 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SGCEO43556 437 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SLC16A7O60669 478 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 OR5F1O95221 314 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF682O95780 498 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 TSPAN15O95858 294 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 CD55P08174 381 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 TSPAN19P0C672 248 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 PSKH1P11801 424 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 GNB2P62879 340 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SCGB2A2Q13296 93 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 MOGQ16653 247 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 RSPO1Q2MKA7 263 aaPredicted RBP5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ESCO2Q56NI9 601 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 CGB2Q6NT52 195 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SLC27A4Q6P1M0 643 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 C16orf87Q6PH81 154 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF826PQ6ZT77 177 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 CCDC80Q76M96 950 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 OAFQ86UD1 273 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 LNX2Q8N448 690 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 PNKDQ8N490 385 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 LINC00471Q8N535 108 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 FAM110DQ8TAY7 271 aaPredicted RBP5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 POP5Q969H6 163 aaKnown RBP5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SLC25A28Q96A46 364 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SEH1LQ96EE3 360 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SAMD8Q96LT4 415 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 CCT8L2Q96SF2 557 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 GPA33Q99795 319 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 PKP2Q99959 881 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ECSITQ9BQ95 431 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 NUDT16L1Q9BRJ7 211 aaKnown RBP5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 MRI1Q9BV20 369 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 TMEM120AQ9BXJ8 343 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SLC19A3Q9BZV2 496 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 SYT4Q9H2B2 425 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 NTN4Q9HB63 628 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 C1RLQ9NZP8 487 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ARMCX1Q9P291 453 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 CTSZQ9UBR2 303 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 OR5V1Q9UGF6 321 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 RPS6KA6Q9UK32 745 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 PRDM4Q9UKN5 801 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 ZDHHC8Q9ULC8 765 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 N6AMT1Q9Y5N5 214 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 V9GYQ6 96 aa5.69□□□□□ -1.5
PRPF40B-214ENST00000551320 DOCK11Q5JSL3 2073 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 IGHV2-70DA0A0C4DH43 119 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 C12orf71A8MTZ7 269 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 MRASO14807 208 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 FAM20BO75063 409 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 IGHV4-59P01825 116 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 ADH4P08319 380 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 KITLGP21583 273 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 KDELR2P33947 212 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 MDH2P40926 338 aaKnown RBP5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 CDKN2AP42771 156 aaKnown RBP5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 PITPNBP48739 271 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 ARHGDIAP52565 204 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 RAG2P55895 527 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 FXYD6P3P58550 94 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 GMFBP60983 142 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 KLF10Q13118 480 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 MAB21L1Q13394 359 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 SEC23BQ15437 767 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 AGBL2Q5U5Z8 902 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 ZNF841Q6ZN19 808 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 CFAP77Q6ZQR2 320 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 FOXL2NBQ6ZUU3 175 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 MUC20Q8N307 709 aaPredicted RBP5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 SPICQ8N5J4 248 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 FITM2Q8N6M3 262 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 FAM86B1Q8N7N1 296 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 C11orf44Q8N8P7 122 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 OR1F12Q8NHA8 337 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 RAB40AQ8WXH6 277 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 DACT3Q96B18 629 aaPredicted RBP5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 HAVCR1Q96D42 359 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 ATP6V1G3Q96LB4 118 aa5.68□□□□□ -1.5
PRPF40B-214ENST00000551320 ALG12Q9BV10 488 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms