RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 SLC7A6OSQ96CW6 309 aaPredicted RBP9.06□□□□□ -0.96
GPN3-208ENST00000550974 SLC25A44Q96H78 314 aaPredicted RBP9.06□□□□□ -0.96
GPN3-208ENST00000550974 TRNT1Q96Q11 434 aaKnown RBP9.06□□□□□ -0.96
GPN3-208ENST00000550974 SPATA9Q9BWV2 254 aa9.06□□□□□ -0.96
GPN3-208ENST00000550974 RMND5AQ9H871 391 aa9.06□□□□□ -0.96
GPN3-208ENST00000550974 SAR1AQ9NR31 198 aa9.06□□□□□ -0.96
GPN3-208ENST00000550974 UFSP2Q9NUQ7 469 aa9.06□□□□□ -0.96
GPN3-208ENST00000550974 RAP2CQ9Y3L5 183 aa9.06□□□□□ -0.96
GPN3-208ENST00000550974 LRRN3E7EW58 273 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 LGALS8O00214 317 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 HMGN4O00479 90 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 MLNRO43193 412 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 LY86O95711 162 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 C1QCP02747 245 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 FRMD6-AS1P0C7T7 363 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 PGA4P0DJD7 388 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 PGA3P0DJD8 388 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 ADORA3P0DMS8 318 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 KITP10721 976 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 IDH3AP50213 366 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 POU4F2Q12837 409 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 KRT72Q14CN4 511 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 C11orf91Q3C1V1 193 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 LIN52Q52LA3 116 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 CLEC12AQ5QGZ9 265 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 EPGNQ6UW88 154 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 FRMD7Q6ZUT3 714 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 CLIP4Q8N3C7 705 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 OR8G5Q8NG78 346 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 AJUBAQ96IF1 538 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 TEX37Q96LM6 180 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 MOGAT1Q96PD6 335 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 ZNF347Q96SE7 839 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 OR2H1Q9GZK4 316 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 WNT5BQ9H1J7 359 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 TUBB1Q9H4B7 451 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 SIAEQ9HAT2 523 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 ARL8BQ9NVJ2 186 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 MRPL39Q9NYK5 338 aaKnown RBP9.05□□□□□ -0.96
GPN3-208ENST00000550974 RPS6KB2Q9UBS0 482 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 GIMAP2Q9UG22 337 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 STARD10Q9Y365 291 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 CAPN7Q9Y6W3 813 aa9.05□□□□□ -0.96
GPN3-208ENST00000550974 NDUFA2O43678 99 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 SLC22A3O75751 556 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 OR6A2O95222 327 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 CPSF4O95639 269 aaKnown RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 BGLAPP02818 100 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 HLA-DPB1P04440 258 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 NR2F1P10589 423 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 TUBG1P23258 451 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 CHI3L1P36222 383 aaPredicted RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 RAB13P51153 203 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 RAB25P57735 213 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 CLRN1P58418 232 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 SGCAQ16586 387 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 PLA1AQ53H76 456 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 PRAMEF6Q5VXH4 476 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 NCR3LG1Q68D85 454 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 OR4F3Q6IEY1 312 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 OR2T2Q6IF00 324 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 C10orf99Q6UWK7 81 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 COLCA1Q6ZS62 124 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 C10orf111Q8N326 155 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 Q8TCH9 128 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 PTP4A1Q93096 173 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 UTP4Q969X6 686 aaKnown RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 ZNF583Q96ND8 569 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 ZNF582Q96NG8 517 aaPredicted RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 KRTAP4-5Q9BYR2 181 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 TUBG2Q9NRH3 451 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 TCF19Q9Y242 345 aa9.04□□□□□ -0.96
GPN3-208ENST00000550974 ZNF256Q9Y2P7 627 aaPredicted RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 SF3B6Q9Y3B4 125 aaKnown RBP9.04□□□□□ -0.96
GPN3-208ENST00000550974 TRAV38-1A0A0B4J264 116 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 ATP5HO75947 161 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 PAICSP22234 425 aaKnown RBP9.03□□□□□ -0.96
GPN3-208ENST00000550974 MPPED2Q15777 294 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 INTS11Q5TA45 600 aaKnown RBP9.03□□□□□ -0.96
GPN3-208ENST00000550974 C1orf94Q6P1W5 598 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 ANKRD46Q86W74 232 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 BHLHE23Q8NDY6 225 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 OR52B2Q96RD2 323 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 C1orf50Q9BV19 199 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
GPN3-208ENST00000550974 ZNF443Q9Y2A4 671 aaPredicted RBP9.03□□□□□ -0.96
GPN3-208ENST00000550974 A6NDX4 124 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 OOEPA6NGQ2 149 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 TMEM233B4DJY2 109 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 SDHDO14521 159 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 HNRNPCL1O60812 293 aaKnown RBP9.02□□□□□ -0.97
GPN3-208ENST00000550974 CCDC22O60826 627 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 PEX11AO75192 247 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 IGHG1P01857 330 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 DUX4L4P0CJ87 422 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 ETFAP13804 333 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 RAC2P15153 192 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 PRPS1L1P21108 318 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 MYCNOSP40205 109 aa9.02□□□□□ -0.97
GPN3-208ENST00000550974 RPL14P50914 215 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms