RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HAX1O00165 279 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 ENTPD6O75354 484 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GLCEO94923 617 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 HPXP02790 462 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GYPBP06028 91 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GAAP10253 952 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 NAT2P11245 290 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 CCL2P13500 99 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 LAP3P28838 519 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 HTR1FP30939 366 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 PYCR1P32322 319 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GLRXP35754 106 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GPR6P46095 362 aaPredicted RBP11.49□□□□□ -0.57
NUP188-211ENST00000550219 ZNF84P51523 738 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 BLVRAP53004 296 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 CDH15P55291 814 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 MRPS34P82930 218 aaKnown RBP11.49□□□□□ -0.57
NUP188-211ENST00000550219 TMED1Q13445 227 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 RIN1Q13671 783 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 ELFN2Q5R3F8 820 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 MEPCEQ7L2J0 689 aaKnown RBP11.49□□□□□ -0.57
NUP188-211ENST00000550219 ZNF584Q8IVC4 421 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 GLB1L2Q8IW92 636 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 SLC22A24Q8N4F4 322 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 NSMAFQ92636 917 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 NABP1Q96AH0 204 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 Q96MT0 163 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 TEAD3Q99594 435 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 SH3GL3Q99963 347 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 MS4A5Q9H3V2 200 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 LPAR2Q9HBW0 351 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 TMEM38BQ9NVV0 291 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 DNAJC27Q9NZQ0 273 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 H2AFY2Q9P0M6 372 aaPredicted RBP11.49□□□□□ -0.57
NUP188-211ENST00000550219 FBXL3Q9UKT7 428 aa11.49□□□□□ -0.57
NUP188-211ENST00000550219 MALRD1Q5VYJ5 2156 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 SLC22A31A6NKX4 558 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 NCR1O76036 304 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 FARS2O95363 451 aaKnown RBP11.48□□□□□ -0.57
NUP188-211ENST00000550219 TFP02787 698 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 SCG5P05408 212 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 CXCR4P61073 352 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 HSF2Q03933 536 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 GLO1Q04760 184 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 APOFQ13790 326 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 NKPD1Q17RQ9 610 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 RGS7BPQ6MZT1 257 aaPredicted RBP11.48□□□□□ -0.57
NUP188-211ENST00000550219 TMEM53Q6P2H8 277 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 SLC30A7Q8NEW0 376 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 PROKR2Q8NFJ6 384 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 SLC26A10Q8NG04 563 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 OR51L1Q8NGJ5 315 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 CNIH3Q8TBE1 160 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 HPS1Q92902 700 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 RFKQ969G6 155 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 OTULINQ96BN8 352 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 CDH20Q9HBT6 801 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 POLE4Q9NR33 117 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 MRPS18AQ9NVS2 196 aaKnown RBP11.48□□□□□ -0.57
NUP188-211ENST00000550219 UBAP1Q9NZ09 502 aa11.48□□□□□ -0.57
NUP188-211ENST00000550219 WARS2Q9UGM6 360 aaKnown RBP11.48□□□□□ -0.57
NUP188-211ENST00000550219 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.48□□□□□ -0.57
NUP188-211ENST00000550219 SERPINA5P05154 406 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 LCKP06239 509 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 OR8G3PP0DMU2 310 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 COL8A2P25067 703 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 GSTT1P30711 240 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 FMO3P31513 532 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 CDAP32320 146 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 THBS2P35442 1172 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 EVX1P49640 407 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 ERVS71-1P61550 626 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 LSM6P62312 80 aaKnown RBP11.47□□□□□ -0.57
NUP188-211ENST00000550219 SMN1Q16637 294 aaKnown RBP11.47□□□□□ -0.57
NUP188-211ENST00000550219 PCK2Q16822 640 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 KLHL12Q53G59 568 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 C6orf141Q5SZD1 244 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 FAM27BQ5VT28 67 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 LIPNQ5VXI9 398 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 GLCCI1Q86VQ1 547 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 TIGD4Q8IY51 512 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 PAQR4Q8N4S7 273 aaPredicted RBP11.47□□□□□ -0.57
NUP188-211ENST00000550219 ZNF511Q8NB15 262 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 C11orf40Q8WZ69 217 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 C1orf159Q96HA4 380 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 RERGLQ9H628 205 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 SIAEQ9HAT2 523 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 ZNF275Q9NSD4 429 aaPredicted RBP11.47□□□□□ -0.57
NUP188-211ENST00000550219 PLCXD1Q9NUJ7 323 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 MRPL22Q9NWU5 206 aaKnown RBP11.47□□□□□ -0.57
NUP188-211ENST00000550219 TAAR3PQ9P1P4 343 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 PCDHGB5Q9Y5G0 923 aa11.47□□□□□ -0.57
NUP188-211ENST00000550219 SNTNA6NMZ2 147 aa11.46□□□□□ -0.57
NUP188-211ENST00000550219 PPIHO43447 177 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms