RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 C22orf46C9J442 243 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 FXYD1O00168 92 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 KHDRBS3O75525 346 aaKnown RBP16.65■□□□□ 0.26
GATC-202ENST00000548171 DBHP09172 617 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 CFHR2P36980 270 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 PSMB10P40306 273 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 KCNJ8Q15842 424 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 ZBED5Q49AG3 693 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 FAM201AQ5SY85 155 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 ASPHD2Q6ICH7 369 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 FAM122BQ7Z309 247 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 BHLHE23Q8NDY6 225 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 ACOT11Q8WXI4 607 aaPredicted RBP16.65■□□□□ 0.26
GATC-202ENST00000548171 GATAD2BQ8WXI9 593 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 SIKE1Q9BRV8 207 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 HCAR1Q9BXC0 346 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 TRIM15Q9C019 465 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 HDHD2Q9H0R4 259 aa16.65■□□□□ 0.26
GATC-202ENST00000548171 RER1O15258 196 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 SLC16A7O60669 478 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 CLPXO76031 633 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 TOX4O94842 621 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 IFNW1P05000 195 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 FPR3P25089 353 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 PMELP40967 661 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 KRR1Q13601 381 aaKnown RBP16.64■□□□□ 0.25
GATC-202ENST00000548171 KCNMB1Q16558 191 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 TAF9Q16594 264 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 RUSC1-AS1Q66K80 236 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 PGM2L1Q6PCE3 622 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 LYPD2Q6UXB3 125 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 ZNF730Q6ZMV8 503 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 TMPRSS11FQ6ZWK6 438 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 GJC3Q8NFK1 279 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 LINC01006Q8NI28 216 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 COQ7Q99807 217 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 SYT4Q9H2B2 425 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 NMNAT1Q9HAN9 279 aaPredicted RBP16.64■□□□□ 0.25
GATC-202ENST00000548171 ACOXLQ9NUZ1 547 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 RHCGQ9UBD6 479 aa16.64■□□□□ 0.25
GATC-202ENST00000548171 COA3Q9Y2R0 106 aaPredicted RBP16.64■□□□□ 0.25
GATC-202ENST00000548171 SLC22A31A6NKX4 558 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 FAM220BPB1ANY3 271 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 SFTPBP07988 381 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 FUT4P22083 530 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 BEND6Q5SZJ8 279 aaPredicted RBP16.63■□□□□ 0.25
GATC-202ENST00000548171 GPR139Q6DWJ6 353 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 MBOAT2Q6ZWT7 520 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 ADCK1Q86TW2 530 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 RERGLQ9H628 205 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 MRGBPQ9NV56 204 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 VSX1Q9NZR4 365 aaPredicted RBP16.63■□□□□ 0.25
GATC-202ENST00000548171 ERVK-18Q9QC07 812 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 POLR1DQ9Y2S0 133 aa16.63■□□□□ 0.25
GATC-202ENST00000548171 PRKDCP78527 4128 aaKnown RBP16.62■□□□□ 0.25
GATC-202ENST00000548171 CENPVL3A0A0U1RRI6 287 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 CDC42EP2O14613 210 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 HLA-DPB1P04440 258 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 MMP9P14780 707 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 SDHAP31040 664 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 CD200P41217 278 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 GPR4P46093 362 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 YAP1P46937 504 aaKnown RBP16.62■□□□□ 0.25
GATC-202ENST00000548171 PROK1P58294 105 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 KRTAP10-3P60369 221 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 HIST1H3AP68431 136 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 MAB21L1Q13394 359 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 HIST2H3PS2Q5TEC6 136 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 COLCA1Q6ZS62 124 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 HIST2H3AQ71DI3 136 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 RRM2BQ7LG56 351 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 PNLDC1Q8NA58 520 aaKnown RBP16.62■□□□□ 0.25
GATC-202ENST00000548171 OR2T12Q8NG77 320 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 WDFY2Q96P53 400 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 TECTBQ96PL2 329 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 TBX15Q96SF7 602 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 TMCC3Q9ULS5 477 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 TMEM5Q9Y2B1 443 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 ZNF281Q9Y2X9 895 aa16.62■□□□□ 0.25
GATC-202ENST00000548171 A0A087WUU8 490 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 A0A0G2JND7 137 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 BBIP1A8MTZ0 92 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 MRASO14807 208 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 FFAR1O14842 300 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 GPR137BO60478 399 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 ZNF26P17031 533 aaPredicted RBP16.61■□□□□ 0.25
GATC-202ENST00000548171 RAD23AP54725 363 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 METTL11BQ5VVY1 283 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 OTPQ5XKR4 325 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 ATP6V1G3Q96LB4 118 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 GPX7Q96SL4 187 aaPredicted RBP16.61■□□□□ 0.25
GATC-202ENST00000548171 MMADHCQ9H3L0 296 aaPredicted RBP16.61■□□□□ 0.25
GATC-202ENST00000548171 TCF7L1Q9HCS4 588 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 NRIP3Q9NQ35 241 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 TRIM36Q9NQ86 728 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 INTS9Q9NV88 658 aaKnown RBP16.61■□□□□ 0.25
GATC-202ENST00000548171 NOP16Q9Y3C1 178 aaKnown RBP16.61■□□□□ 0.25
GATC-202ENST00000548171 SNX13Q9Y5W8 968 aa16.61■□□□□ 0.25
GATC-202ENST00000548171 IGHV1-69DA0A0B4J2H0 117 aa16.6■□□□□ 0.25
GATC-202ENST00000548171 FAM20BO75063 409 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms