RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 AWAT2Q6E213 333 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 LIN54Q6MZP7 749 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 DEDD2Q8WXF8 326 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 NTN3O00634 580 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-209ENST00000547018 TTRP02766 147 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 SP9P0CG40 484 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 PSMB1P20618 241 aaKnown RBP11.28□□□□□ -0.6
SCAF11-209ENST00000547018 LCN1P31025 176 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 FAPQ12884 760 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 BPHLQ86WA6 291 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-209ENST00000547018 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 ULBP2Q9BZM5 246 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 SELENOIQ9C0D9 397 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 CNTD2Q9H8S5 307 aa11.28□□□□□ -0.6
SCAF11-209ENST00000547018 PRMT8Q9NR22 394 aaPredicted RBP11.28□□□□□ -0.6
SCAF11-209ENST00000547018 NXT1Q9UKK6 140 aaKnown RBP11.28□□□□□ -0.6
SCAF11-209ENST00000547018 DIDO1Q9BTC0 2240 aaKnown RBP11.27□□□□□ -0.6
SCAF11-209ENST00000547018 GGT3PA6NGU5 568 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 CELA3AP09093 270 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 TDGF1P13385 188 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 B4GALT1P15291 398 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 KLF9Q13886 244 aaPredicted RBP11.27□□□□□ -0.6
SCAF11-209ENST00000547018 ALKBH2Q6NS38 261 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 SLC23A3Q6PIS1 610 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 PPP1R32Q7Z5V6 425 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 ANGPTL5Q86XS5 388 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 OR4C16Q8NGL9 310 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 AKR7LQ8NHP1 331 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.6
SCAF11-209ENST00000547018 PIGTQ969N2 578 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 G6PC2Q9NQR9 355 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 LRFN1Q9P244 771 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 SPTAN1Q13813 2472 aaKnown RBP11.27□□□□□ -0.6
SCAF11-209ENST00000547018 ATMQ13315 3056 aa11.27□□□□□ -0.6
SCAF11-209ENST00000547018 GABARAPH6UMI1 98 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 PYCARD-AS1I3L0S3 204 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 ZIC3O60481 467 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 MSX1P28360 303 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 CX3CR1P49238 355 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 EXT1Q16394 746 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 LRRC37A5PQ49AS3 106 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 ABHD3Q8WU67 409 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 OXGR1Q96P68 337 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 SRXN1Q9BYN0 137 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 STRADBQ9C0K7 418 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 OR2B2Q9GZK3 357 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 TINAGL1Q9GZM7 467 aaPredicted RBP11.27□□□□□ -0.61
SCAF11-209ENST00000547018 CHST6Q9GZX3 395 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 EXO5Q9H790 373 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 MGAT4CQ9UBM8 478 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 PCDHGA5Q9Y5G8 931 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 FAM25EA8MYX2 175 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 ACOT7O00154 380 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF208O43345 1280 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 AMY2AP04746 511 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 PGA4P0DJD7 388 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 PGA3P0DJD8 388 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 GNB3P16520 340 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 NAGAP17050 411 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 CARD18P57730 90 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 PMPCAQ10713 525 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 OR1J2Q8NGS2 313 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 TNFAIP8L1Q8WVP5 186 aa11.27□□□□□ -0.61
SCAF11-209ENST00000547018 A0A096LPE4 126 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 LOC100289279A0A1B0GTE1 492 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 A0A1W2PPC1 479 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 A0A1W2PPZ6 126 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 PINLYPA6NC86 204 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TEX46H3BTG2 121 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TNFSF15O95150 251 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CCL2P13500 99 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 LIFP15018 202 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 FAHP16930 419 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CYB561P49447 251 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF81P51508 661 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 SNU13P55769 128 aaKnown RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 SLC35A1P78382 337 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 THEM4Q5T1C6 240 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TMEM164Q5U3C3 297 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 OLFML2AQ68BL7 652 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 NHLRC1Q6VVB1 395 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF704Q6ZNC4 412 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TMPRSS7Q7RTY8 843 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 FAM219AQ8IW50 185 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 POTEKPQ9BYX7 375 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CRLF2Q9HC73 371 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 DEPPQ9NTK1 212 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TRBV5-7A0A0A0MS05 114 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 E9PLN8 166 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ZNF432O94892 652 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 GLSO94925 669 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-209ENST00000547018 ITGB2P05107 769 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CDNFQ49AH0 187 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 TMEM244Q5VVB8 128 aa11.26□□□□□ -0.61
SCAF11-209ENST00000547018 CDCP2Q5VXM1 449 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms