RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 COLCA1Q6ZS62 124 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 TMPRSS11FQ6ZWK6 438 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 GLB1L2Q8IW92 636 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 RNF113BQ8IZP6 322 aaKnown RBP13.84□□□□□ -0.19
CPSF7-225ENST00000545934 CELF2-AS1Q8N7Q2 184 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 ACOT11Q8WXI4 607 aaPredicted RBP13.84□□□□□ -0.19
CPSF7-225ENST00000545934 DYRK2Q92630 601 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 ZNF570Q96NI8 536 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 TBX15Q96SF7 602 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 TNFRSF19Q9NS68 423 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 SNX13Q9Y5W8 968 aa13.84□□□□□ -0.19
CPSF7-225ENST00000545934 TET2Q6N021 2002 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-225ENST00000545934 A0A087WUU8 490 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 IGHV3-64DA0A0J9YX35 117 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 FAM220BPB1ANY3 271 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 ZNF879B4DU55 563 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 J3KTA2 159 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 XKRYO14609 159 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 IMPA2O14732 288 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 NPPAP01160 153 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 IFNA8P32881 189 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 NPY4RP50391 375 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 PDCD1Q15116 288 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 ZBED5Q49AG3 693 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 LRRC23Q53EV4 343 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-225ENST00000545934 METTL21CQ5VZV1 264 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 ZNF620Q6ZNG0 422 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 MBOAT2Q6ZWT7 520 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 LINC01006Q8NI28 216 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 SSMEM1Q8WWF3 244 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 ERGIC1Q969X5 290 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 TPD52L3Q96J77 140 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 COQ7Q99807 217 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 PCGF1Q9BSM1 259 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 NMNAT1Q9HAN9 279 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-225ENST00000545934 TMEM100Q9NV29 134 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 VSX1Q9NZR4 365 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-225ENST00000545934 RHCGQ9UBD6 479 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 CTSZQ9UBR2 303 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 COA3Q9Y2R0 106 aaPredicted RBP13.83□□□□□ -0.2
CPSF7-225ENST00000545934 RNF114Q9Y508 228 aa13.83□□□□□ -0.2
CPSF7-225ENST00000545934 SLC16A7O60669 478 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 KHDRBS3O75525 346 aaKnown RBP13.82□□□□□ -0.2
CPSF7-225ENST00000545934 HLA-DPB1P04440 258 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 RPL4P36578 427 aaKnown RBP13.82□□□□□ -0.2
CPSF7-225ENST00000545934 CD200P41217 278 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 GPR4P46093 362 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 YAP1P46937 504 aaKnown RBP13.82□□□□□ -0.2
CPSF7-225ENST00000545934 KRR1Q13601 381 aaKnown RBP13.82□□□□□ -0.2
CPSF7-225ENST00000545934 TTMPQ5BVD1 217 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 BHLHE23Q8NDY6 225 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 HDHD2Q9H0R4 259 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 SYT4Q9H2B2 425 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 NRIP3Q9NQ35 241 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 LHFPL6Q9Y693 200 aa13.82□□□□□ -0.2
CPSF7-225ENST00000545934 SLC22A31A6NKX4 558 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 GPR137BO60478 399 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 FAM20BO75063 409 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 PTP4A3O75365 173 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 PTBP3O95758 552 aaKnown RBP13.81□□□□□ -0.2
CPSF7-225ENST00000545934 LIPFP07098 398 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 FPR3P25089 353 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 SDHAP31040 664 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 TAF9Q16594 264 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 TBPL2Q6SJ96 375 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 VTCN1Q7Z7D3 282 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 LDLRAD3Q86YD5 345 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 C19orf18Q8NEA5 215 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 DYDC1Q8WWB3 177 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 ATP6V1G3Q96LB4 118 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
CPSF7-225ENST00000545934 SIKE1Q9BRV8 207 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 FNDC11Q9BVV2 318 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 NUAK2Q9H093 628 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 SIRPDQ9H106 197 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 WDR76Q9H967 626 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 ACOXLQ9NUZ1 547 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 TMCC3Q9ULS5 477 aa13.81□□□□□ -0.2
CPSF7-225ENST00000545934 IGHV1-69DA0A0B4J2H0 117 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 PLXNB1O43157 2135 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 TOX4O94842 621 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 TSPAN15O95858 294 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 IGHV1-69P01742 117 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 IFNW1P05000 195 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 IRF2P14316 349 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 IER3P46695 156 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 HOXA4Q00056 320 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-225ENST00000545934 GK2Q14410 553 aaPredicted RBP13.8□□□□□ -0.2
CPSF7-225ENST00000545934 CD276Q5ZPR3 534 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 GPR139Q6DWJ6 353 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 PTCHD4Q6ZW05 846 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 GJC3Q8NFK1 279 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 OR2T12Q8NG77 320 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 TBC1D15Q8TC07 691 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 GATAD2BQ8WXI9 593 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 WDFY2Q96P53 400 aa13.8□□□□□ -0.2
CPSF7-225ENST00000545934 BBIP1A8MTZ0 92 aa13.79□□□□□ -0.2
CPSF7-225ENST00000545934 MRASO14807 208 aa13.79□□□□□ -0.2
CPSF7-225ENST00000545934 EDF1O60869 148 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms