RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 WIPI1Q5MNZ9 446 aaPredicted RBP12.5□□□□□ -0.41
LDB3-207ENST00000542786 ELFN2Q5R3F8 820 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 GLYATL3Q5SZD4 288 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 SPINK14Q6IE38 97 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 GLRX5Q86SX6 157 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 OR6N1Q8NGY5 312 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 FGGYQ96C11 551 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
LDB3-207ENST00000542786 ZNF486Q96H40 463 aaPredicted RBP12.5□□□□□ -0.41
LDB3-207ENST00000542786 SIGLEC12Q96PQ1 595 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 NELFAQ9H3P2 528 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 CDV3Q9UKY7 258 aaKnown RBP12.5□□□□□ -0.41
LDB3-207ENST00000542786 FLVCR1Q9Y5Y0 555 aa12.5□□□□□ -0.41
LDB3-207ENST00000542786 C5orf63A6NC05 138 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 WDPCPO95876 746 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 ECDO95905 644 aaPredicted RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 F10P00742 488 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 HSD11B1P28845 292 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 IFITM2Q01629 132 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 OR2M7Q8NG81 312 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 ZNF837Q96EG3 531 aaPredicted RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 DMRTB1Q96MA1 342 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 SFXN2Q96NB2 322 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 SOX7Q9BT81 388 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 MOV10Q9HCE1 1003 aaKnown RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 MRPL15Q9P015 296 aaKnown RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 LRFN1Q9P244 771 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 WDFY3Q8IZQ1 3526 aa12.49□□□□□ -0.41
LDB3-207ENST00000542786 NCOA6Q14686 2063 aaPredicted RBP12.49□□□□□ -0.41
LDB3-207ENST00000542786 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 E9PLN8 166 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 H7C417 338 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 SYT7O43581 403 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 CXCL13O43927 109 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OTX1P32242 354 aaPredicted RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 STARP49675 285 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 PRKXP51817 358 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 NUBP1P53384 320 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 CARD18P57730 90 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 GRB2P62993 217 aaKnown RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 QRFPP83859 136 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OC90Q02509 493 aaPredicted RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 SGCAQ16586 387 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 DTX1Q86Y01 620 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OR4D6Q8NGJ1 314 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OR51E1Q8TCB6 317 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 FAM173AQ9BQD7 235 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 BEX2Q9BXY8 128 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 ZNF703Q9H7S9 590 aaPredicted RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 MCUBQ9NWR8 336 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 MTFP1Q9UDX5 166 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 ZNF318Q5VUA4 2279 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 NAP1L6A6NFF2 107 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 ALDOBP05062 364 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 CX3CR1P49238 355 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 AP3S2P59780 193 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 MRPS34P82930 218 aaKnown RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 CD83Q01151 205 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 ZFP69Q49AA0 526 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 CCDC92Q53HC0 331 aaPredicted RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 Q6ZSR3 168 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 ADGRE4PQ86SQ3 457 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OR5AS1Q8N127 324 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 NKD1Q969G9 470 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 PTX4Q96A99 478 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 UTP23Q9BRU9 249 aaKnown RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 HES7Q9BYE0 225 aa12.48□□□□□ -0.41
LDB3-207ENST00000542786 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
LDB3-207ENST00000542786 OTOGLQ3ZCN5 2332 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 HPNP05981 417 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 H2AFB2P0C5Z0 115 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 SLC2A1P11166 492 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 GDF1P27539 372 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 BDKRB2P30411 391 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
LDB3-207ENST00000542786 GSG1Q2KHT4 349 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 ABHD17BQ5VST6 288 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 FAM27BQ5VT28 67 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 AKAP1Q92667 903 aaKnown RBP eCLIP12.47□□□□□ -0.41
LDB3-207ENST00000542786 PNPLA2Q96AD5 504 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
LDB3-207ENST00000542786 TRAV18A0A075B6X5 111 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 A0A1B0GVI7 797 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 OR5H15A6NDH6 313 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 STMND1H3BQB6 276 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 POU3F2P20265 443 aaPredicted RBP12.46□□□□□ -0.41
LDB3-207ENST00000542786 RAB6AP20340 208 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 SDHBP21912 280 aa12.46□□□□□ -0.41
LDB3-207ENST00000542786 GUCA2AQ02747 115 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms