RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 HMGN5P82970 282 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 NCF4Q15080 339 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF726P1Q15940 193 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 PSMD5Q16401 504 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 HSP90AB3PQ58FF7 597 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RNASE13Q5GAN3 156 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 AVPI1Q5T686 147 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 C9orf135Q5VTT2 229 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ADNP2Q6IQ32 1131 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 REEP3Q6NUK4 255 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CMC1Q7Z7K0 106 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CDR2LQ86X02 465 aaPredicted RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 NPWQ8N729 165 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 OR52E2Q8NGJ4 325 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 OR51E1Q8TCB6 317 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ACMSDQ8TDX5 336 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 APH1BQ8WW43 257 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CAPSLQ8WWF8 208 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF317Q96PQ6 595 aaPredicted RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RSG1Q9BU20 258 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 TEKT3Q9BXF9 490 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ILKAPQ9H0C8 392 aaPredicted RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 C1orf198Q9H425 327 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DHX35Q9H5Z1 703 aaKnown RBP1.14□□□□□ -2.23
KNTC1-213ENST00000542727 ANKRA2Q9H9E1 313 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 RETNQ9HD89 108 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 C8orf17Q9NRJ1 99 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 AGPAT4Q9NRZ5 378 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 C21orf62Q9NYP8 219 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 PTTG3PQ9NZH4 202 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 EXTL2Q9UBQ6 330 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 DUX4Q9UBX2 424 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 CBY1Q9Y3M2 126 aa1.14□□□□□ -2.23
KNTC1-213ENST00000542727 MIA3Q5JRA6 1907 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 KIR2DS1A0A191URI9 304 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF98A6NK75 572 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 BTNL10A8MVZ5 291 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 DNASE2O00115 360 aaPredicted RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 PLPP1O14494 284 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 EIF3HO15372 352 aaKnown RBP eCLIP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 EIF1BO60739 113 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CLDN11O75508 207 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CBR3O75828 277 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 IGKV1D-16P01601 117 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CD74P04233 296 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 ATF6P18850 670 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 EIF2S2P20042 333 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 IL32P24001 234 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CD34P28906 385 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 RRM2P31350 389 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 TGFBR1P36897 503 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 EIF1P41567 113 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 GDI2P50395 445 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 RAB7AP51149 207 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 TAS2R46P59540 309 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 SEMG2Q02383 582 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 SP4Q02446 784 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 FUT5Q11128 374 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 DMC1Q14565 340 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 KIR2DS1Q14954 304 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 YIF1BQ5BJH7 314 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 C22orf42Q6IC83 251 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CERS6Q6ZMG9 384 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 TAS2R42Q7RTR8 314 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 SLC16A14Q7RTX9 510 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 FAM71AQ8IYT1 594 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 ZNF645Q8N7E2 425 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 OR4A4PQ8NGN8 299 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 LYPD6BQ8NI32 183 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 NUBPLQ8TB37 319 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 DCPSQ96C86 337 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 COL21A1Q96P44 957 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 NUP58Q9BVL2 599 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 RACGAP1Q9H0H5 632 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM27Q9HBJ8 222 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 MYOZ1Q9NP98 299 aaPredicted RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 EXOSC4Q9NPD3 245 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 RHBDL2Q9NX52 303 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 CCDC59Q9P031 241 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 DHCR7Q9UBM7 475 aaKnown RBP1.13□□□□□ -2.23
KNTC1-213ENST00000542727 HPCAL4Q9UM19 191 aa1.13□□□□□ -2.23
KNTC1-213ENST00000542727 ITGB4P16144 1822 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 PLXNB1O43157 2135 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 NUP205Q92621 2012 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 IGKV2-24A0A0C4DH68 120 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 A0A0J9YXV3 536 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 TMEM120BA0PK00 339 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 GOLGA8OA6NCC3 632 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 OR5H1A6NKK0 313 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 KRBOX1C9JBD0 128 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 GOLGA8NF8WBI6 632 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SIRPB1O00241 398 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CNMDO75829 334 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CIB2O75838 187 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 FLOT1O75955 427 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CYB5R3P00387 301 aaPredicted RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 SERPINE2P07093 398 aa1.12□□□□□ -2.23
KNTC1-213ENST00000542727 CSNK2A2P19784 350 aaPredicted RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 GTF2E2P29084 291 aaKnown RBP1.12□□□□□ -2.23
KNTC1-213ENST00000542727 OR1E1P30953 314 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms