RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CFL1P23528 166 aaKnown RBP12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 MYL9P24844 172 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 MAPK3P27361 379 aaPredicted RBP12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 CALRP27797 417 aaKnown RBP12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 CD40LGP29965 261 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 PCBD1P61457 104 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF45Q02386 682 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 RAB35Q15286 201 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 Q499Y3 187 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 ELFN2Q5R3F8 820 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 SLC16A14Q7RTX9 510 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 TPRA1Q86W33 373 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 UBE2J2Q8N2K1 259 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 GALNT11Q8NCW6 608 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 FAM57AQ8TBR7 257 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 GPR148Q8TDV2 347 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 OR14A2Q96R54 314 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 ATF6BQ99941 703 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 SH3GL3Q99963 347 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 SNTG1Q9NSN8 517 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 PRSS50Q9UI38 385 aa12.48□□□□□ -0.41
CYB561A3-216ENST00000540755 TRAV1-2A0A0B4J238 106 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 SHISA3A0PJX4 238 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF879B4DU55 563 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 CNOT4O95628 575 aaKnown RBP12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 ISG15P05161 165 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 TPOP07202 933 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 HOXD4P09016 255 aaPredicted RBP12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 RNF224P0DH78 156 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 MPGP29372 298 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 FAPQ12884 760 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 TFAP2EQ6VUC0 442 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF704Q6ZNC4 412 aaPredicted RBP12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 SKA3Q8IX90 412 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 CISD2Q8N5K1 135 aaKnown RBP12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 AP3S1Q92572 193 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 DERL3Q96Q80 235 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 KCNJ15Q99712 375 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 SLX1AQ9BQ83 275 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 HDHD2Q9H0R4 259 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 PPIL3Q9H2H8 161 aaKnown RBP12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 AKIP1Q9NQ31 210 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 PLEK2Q9NYT0 353 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 GTF2A1LQ9UNN4 478 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
CYB561A3-216ENST00000540755 ACOD1A6NK06 481 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 SGCEO43556 437 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 RAF1P04049 648 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 CRHP06850 196 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 MMP7P09237 267 aaPredicted RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 CLEC2LP0C7M8 214 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 OCM2P0CE71 109 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 UBCP0CG48 685 aaKnown RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF12P17014 697 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 ZNF32P17041 273 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 OTX1P32242 354 aaPredicted RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 KIR2DL2P43627 348 aaPredicted RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 CX3CR1P49238 355 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 MXD1Q05195 221 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 ECH1Q13011 328 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 EIF2S3LQ2VIR3 472 aaKnown RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 HSD17B12Q53GQ0 312 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 FAM27D1Q5T7N8 215 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 C1orf185Q5T7R7 199 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 BCL2L15Q5TBC7 163 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 CD163Q86VB7 1156 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 ELMOD2Q8IZ81 293 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 NUFIP1Q9UHK0 495 aaKnown RBP12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 SLC5A6Q9Y289 635 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
CYB561A3-216ENST00000540755 TRBV5-7A0A0A0MS05 114 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 IQCMA0A1B0GVH7 501 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 PIN1P1O15428 100 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 SYNGR3O43761 229 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 DOK2O60496 412 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 TMEM127O75204 238 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 APOC1P02654 83 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 ITGA5P08648 1049 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 ACHEP22303 614 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 ETV6P41212 452 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 FOXG1P55316 489 aaPredicted RBP12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 HNRNPA0Q13151 305 aaKnown RBP12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 ODF4Q2M2E3 257 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 SLC36A2Q495M3 483 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 TMEM244Q5VVB8 128 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 RTL6Q6ICC9 239 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 C16orf87Q6PH81 154 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 SEM1Q6ZVN7 128 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 RDH10Q8IZV5 341 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 ZNF283Q8N7M2 679 aa12.46□□□□□ -0.42
CYB561A3-216ENST00000540755 SPTSSAQ969W0 71 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms