RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 RNF113BQ8IZP6 322 aaKnown RBP16.57■□□□□ 0.24
LPCAT3-210ENST00000540090 Q8TCH9 128 aa16.57■□□□□ 0.24
LPCAT3-210ENST00000540090 ERGIC1Q969X5 290 aa16.57■□□□□ 0.24
LPCAT3-210ENST00000540090 COA3Q9Y2R0 106 aaPredicted RBP16.57■□□□□ 0.24
LPCAT3-210ENST00000540090 ZNF879B4DU55 563 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 FXYD1O00168 92 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 KHDRBS3O75525 346 aaKnown RBP16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 IRF2P14316 349 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 NPY4RP50391 375 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 PROK1P58294 105 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 MAB21L1Q13394 359 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 TRAM2Q15035 370 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 CD276Q5ZPR3 534 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 CELF2-AS1Q8N7Q2 184 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 BHLHE23Q8NDY6 225 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 TBC1D15Q8TC07 691 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 TPD52L3Q96J77 140 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 TBX15Q96SF7 602 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 ACOXLQ9NUZ1 547 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 KIF17Q9P2E2 1029 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 RHCGQ9UBD6 479 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 ZNF281Q9Y2X9 895 aa16.56■□□□□ 0.24
LPCAT3-210ENST00000540090 SLC22A31A6NKX4 558 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 CDC42EP2O14613 210 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 SLC16A7O60669 478 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 TOX4O94842 621 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 HLA-DPB1P04440 258 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 FPR3P25089 353 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 YAP1P46937 504 aaKnown RBP16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 HIST1H3AP68431 136 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 KCNMB1Q16558 191 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 ZBED5Q49AG3 693 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 LRRC23Q53EV4 343 aaPredicted RBP16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 HIST2H3PS2Q5TEC6 136 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 TMPRSS11FQ6ZWK6 438 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 HIST2H3AQ71DI3 136 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 GATAD2BQ8WXI9 593 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 ZNF570Q96NI8 536 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 COQ7Q99807 217 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 FNDC11Q9BVV2 318 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 SYT4Q9H2B2 425 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 NMNAT1Q9HAN9 279 aaPredicted RBP16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 TMCC3Q9ULS5 477 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 SNX13Q9Y5W8 968 aa16.55■□□□□ 0.24
LPCAT3-210ENST00000540090 A0A087WUU8 490 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 J3KTA2 159 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 FFAR1O14842 300 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 GPR137BO60478 399 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 NPPAP01160 153 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 RSPO1Q2MKA7 263 aaPredicted RBP16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 CLEC12AQ5QGZ9 265 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 BEND6Q5SZJ8 279 aaPredicted RBP16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 METTL21CQ5VZV1 264 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 TBPL2Q6SJ96 375 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 COLCA1Q6ZS62 124 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 MBOAT2Q6ZWT7 520 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 C19orf18Q8NEA5 215 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 GJC3Q8NFK1 279 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 OR11L1Q8NGX0 322 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 ACOT11Q8WXI4 607 aaPredicted RBP16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 WDFY2Q96P53 400 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 HCAR1Q9BXC0 346 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 TRIM15Q9C019 465 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 RERGLQ9H628 205 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 WDR76Q9H967 626 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 VSX1Q9NZR4 365 aaPredicted RBP16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 ERVK-18Q9QC07 812 aa16.54■□□□□ 0.24
LPCAT3-210ENST00000540090 FAM20BO75063 409 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 CD200P41217 278 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 RAD23AP54725 363 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 COQ5Q5HYK3 327 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 ZNF730Q6ZMV8 503 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 C1QL4Q86Z23 238 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 HDHD2Q9H0R4 259 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 TCF7L1Q9HCS4 588 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 CTSZQ9UBR2 303 aa16.53■□□□□ 0.24
LPCAT3-210ENST00000540090 IGHV1-69DA0A0B4J2H0 117 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 IMPA2O14732 288 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 PTP4A3O75365 173 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 TSPAN15O95858 294 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 IGHV1-69P01742 117 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 IGHV4-59P01825 116 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 SDHAP31040 664 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 GPR4P46093 362 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 IER3P46695 156 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 KRR1Q13601 381 aaKnown RBP16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 MPPED2Q15777 294 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 KCNJ8Q15842 424 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 KRTAP27-1Q3LI81 207 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 GPR139Q6DWJ6 353 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 LDLRAD3Q86YD5 345 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 ZSCAN4Q8NAM6 433 aaPredicted RBP16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 LZICQ8WZA0 190 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 TECTBQ96PL2 329 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 NUAK2Q9H093 628 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 NRIP3Q9NQ35 241 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 LHFPL6Q9Y693 200 aa16.52■□□□□ 0.24
LPCAT3-210ENST00000540090 FAM220BPB1ANY3 271 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms