RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GDF1P27539 372 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 NUP62P37198 522 aaPredicted RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 RAP1BP61224 184 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 RAP1AP62834 184 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 RAC1P63000 192 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 SLC35A1P78382 337 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ELFN2Q5R3F8 820 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 HES5Q5TA89 166 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 UEVLDQ8IX04 471 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ADPRHL1Q8NDY3 354 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR2M7Q8NG81 312 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR6M1Q8NGM8 313 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR6N2Q8NGY6 317 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 WBP1Q96G27 269 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ADAD1Q96M93 576 aaKnown RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 NOX4Q9NPH5 578 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 NPDC1Q9NQX5 325 aaPredicted RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 SDHAF2Q9NX18 166 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 IGKV1D-43A0A0B4J1Z2 117 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 NPIPB13A6NJU9 1138 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF879B4DU55 563 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 NPIPB4C9JG80 1138 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 GABARAPH6UMI1 98 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ARPC1BO15143 372 aaKnown RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 PMS2P2O95744 297 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 CD1AP06126 327 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 SRMP19623 302 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 RIPPLY1Q0D2K3 151 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 OPCMLQ14982 345 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 TUSC1Q2TAM9 212 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 UNQ9370/PRO34162Q6UXP9 181 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 CDC20BQ86Y33 519 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 SULF2Q8IWU5 870 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 ORAI1Q96D31 301 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 SLC25A38Q96DW6 304 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 INTS14Q96SY0 518 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 GFI1Q99684 422 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 REG4Q9BYZ8 158 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 KIF25Q9UIL4 384 aa15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 COA3Q9Y2R0 106 aaPredicted RBP15.18■□□□□ 0.02
PCDHB17P-201ENST00000539533 AKAP13Q12802 2813 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 IGHV3-15A0A0B4J1V0 119 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 NAP1L6A6NFF2 107 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 AQP7P3A6NL99 342 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 TNFSF11O14788 317 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 PSMB10P40306 273 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 AP3S2P59780 193 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 H3F3AP84243 136 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR52H1Q8NGJ2 320 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 OR10Z1Q8NGY1 313 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 FAM173AQ9BQD7 235 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 SEC22CQ9BRL7 303 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 MS4A7Q9GZW8 240 aaPredicted RBP15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 SLC25A18Q9H1K4 315 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 MRPL22Q9NWU5 206 aaKnown RBP15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 KLHL9Q9P2J3 617 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 KLHL13Q9P2N7 655 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 MGAT4CQ9UBM8 478 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 TUBAL3A6NHL2 446 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 IFITM5A6NNB3 132 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 AIPO00170 330 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 PIN1P1O15428 100 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 TRAF3IP2O43734 574 aaPredicted RBP15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 KRT33AO76009 404 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 MPZL1O95297 269 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 ALDOBP05062 364 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 RAD52P43351 418 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 STARP49675 285 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF273Q14593 569 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 MEP1BQ16820 701 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 SLC25A25Q6KCM7 469 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 OXGR1Q96P68 337 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 PIPOXQ9P0Z9 390 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 KLK11Q9UBX7 282 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 BOKQ9UMX3 212 aaPredicted RBP15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 SESN1Q9Y6P5 492 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 DCHS1Q96JQ0 3298 aa15.17■□□□□ 0.02
PCDHB17P-201ENST00000539533 NUPL2O15504 423 aaKnown RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 KHDRBS3O75525 346 aaKnown RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 C4BPBP20851 252 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 DHODHQ02127 395 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF239Q16600 458 aaKnown RBP15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF684Q5T5D7 378 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 SERPINA12Q8IW75 414 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 PHYHIPQ92561 330 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 MARC2Q969Z3 335 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 SFXN2Q96NB2 322 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 UCN2Q96RP3 112 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 SHARPINQ9H0F6 387 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 KCNG2Q9UJ96 466 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 LAMP5Q9UJQ1 280 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 LAMA5O15230 3695 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 MFSD2BA6NFX1 497 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 PDCD5O14737 125 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 NDUFA2O43678 99 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 GPRIN2O60269 458 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 ZNF43P17038 809 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 ALOX5APP20292 161 aa15.16■□□□□ 0.02
PCDHB17P-201ENST00000539533 CRABP1P29762 137 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms