RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 IL4P05112 153 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 LINC00869P0C866 280 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 GALP22466 123 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 RBM34P42696 430 aaKnown RBP3.86□□□□□ -1.79
TRAV11-201ENST00000539512 CCNA1P78396 465 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 IL18Q14116 193 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 TMEM53Q6P2H8 277 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF615Q8N8J6 731 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 OR4K5Q8NGD3 323 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 OR10AD1Q8NGE0 317 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 LILRB4Q8NHJ6 448 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 DOK1Q99704 481 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 TBL1YQ9BQ87 522 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 ANKRD60Q9BZ19 345 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 UCK2Q9BZX2 261 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 TMEM38AQ9H6F2 299 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 NTN4Q9HB63 628 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 AGPAT4Q9NRZ5 378 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 CLN8Q9UBY8 286 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 SRCAPQ6ZRS2 3230 aa3.86□□□□□ -1.79
TRAV11-201ENST00000539512 URB2Q14146 1524 aaKnown RBP3.85□□□□□ -1.79
TRAV11-201ENST00000539512 GPATCH8Q9UKJ3 1502 aaKnown RBP3.85□□□□□ -1.79
TRAV11-201ENST00000539512 IGLV2-18A0A075B6J9 118 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 TRAV6A0A075B6T7 132 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 A0A0U1RQV1 116 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 H7C417 338 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 M0R3G1 203 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 CASQ2O14958 399 aaPredicted RBP3.85□□□□□ -1.79
TRAV11-201ENST00000539512 GCM2O75603 506 aaPredicted RBP3.85□□□□□ -1.79
TRAV11-201ENST00000539512 HLA-DQA1P01909 254 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 ATF6P18850 670 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 TALDO1P37837 337 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 RAB9AP51151 201 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 RPS23P62266 143 aaKnown RBP3.85□□□□□ -1.79
TRAV11-201ENST00000539512 KIR2DS1Q14954 304 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 MPV17L2Q567V2 206 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 SAXO2Q658L1 398 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 NKAIN4Q8IVV8 208 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 CSGALNACT2Q8N6G5 542 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 NPWQ8N729 165 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF709Q8N972 641 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 BBOF1Q8ND07 529 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 C1orf198Q9H425 327 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 MED4Q9NPJ6 270 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 SLC39A1Q9NY26 324 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 MTFP1Q9UDX5 166 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 PLA2R1Q13018 1463 aa3.85□□□□□ -1.79
TRAV11-201ENST00000539512 SMARCA4P51532 1647 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 DNAJB6O75190 326 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 RCBTB2O95199 551 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF806P0C7X5 589 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 CD37P11049 281 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 IL1RNP18510 177 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 CSNK2A2P19784 350 aaPredicted RBP3.84□□□□□ -1.79
TRAV11-201ENST00000539512 OPRK1P41145 380 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 CACNG7P62955 275 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 SEMG2Q02383 582 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 DGCR6Q14129 220 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 LCE3AQ5TA76 89 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 ADNP2Q6IQ32 1131 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 NEGR1Q7Z3B1 354 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 CDKL3Q8IVW4 592 aaPredicted RBP3.84□□□□□ -1.79
TRAV11-201ENST00000539512 ZNF488Q96MN9 340 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 MTG1Q9BT17 334 aaPredicted RBP3.84□□□□□ -1.79
TRAV11-201ENST00000539512 SLC7A5P2Q9GIP4 190 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 NEUROG2Q9H2A3 272 aa3.84□□□□□ -1.79
TRAV11-201ENST00000539512 MRPL22Q9NWU5 206 aaKnown RBP3.84□□□□□ -1.79
TRAV11-201ENST00000539512 A6NDN8 102 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 K7EMT4 169 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 DNASE2O00115 360 aaPredicted RBP3.83□□□□□ -1.8
TRAV11-201ENST00000539512 SLC9A3R1O14745 358 aaPredicted RBP3.83□□□□□ -1.8
TRAV11-201ENST00000539512 RRP8O43159 456 aaKnown RBP3.83□□□□□ -1.8
TRAV11-201ENST00000539512 CHMP2AO43633 222 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 AQP8O94778 261 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 HPRT1P00492 218 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 CTSLP07711 333 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 CXCL12P48061 93 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 SLC11A1P49279 550 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 PRR3P79522 188 aaKnown RBP3.83□□□□□ -1.8
TRAV11-201ENST00000539512 CDK5Q00535 292 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 ZFP1Q6P2D0 407 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 SLC25A34Q6PIV7 304 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 ANGPTL8Q6UXH0 198 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 HMGN2P46Q86SG4 172 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 LINC01560Q8TB33 94 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 BPIFA3Q9BQP9 254 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 RSG1Q9BU20 258 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 OR52D1Q9H346 318 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 TMEM27Q9HBJ8 222 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 WFDC1Q9HC57 220 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 GGA2Q9UJY4 613 aa3.83□□□□□ -1.8
TRAV11-201ENST00000539512 CHD1O14646 1710 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 IFT140Q96RY7 1462 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 NSD2O96028 1365 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 PALLDQ8WX93 1383 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 GAKO14976 1311 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 UBN2Q6ZU65 1347 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 NCBP2LA6PVI3 153 aaKnown RBP3.82□□□□□ -1.8
TRAV11-201ENST00000539512 CACNG3O60359 315 aa3.82□□□□□ -1.8
TRAV11-201ENST00000539512 REM1O75628 298 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms