RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 SNRPNP63162 240 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 DLK1P80370 383 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 RASGEF1BQ0VAM2 473 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 PIP5KL1Q5T9C9 394 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 COMMD6Q7Z4G1 85 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 TMEM150AQ86TG1 271 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 NRMQ8IXM6 262 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 C10orf53Q8N6V4 93 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 TMEM229BQ8NBD8 167 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 OR5T1Q8NG75 326 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 WFIKKN1Q96NZ8 548 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 INTS14Q96SY0 518 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 STACQ99469 402 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 TTTY10Q9BZA0 68 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 GPR173Q9NS66 373 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 MEMO1Q9Y316 297 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 URGCP-MRPS24S4R325 110 aa9.83□□□□□ -0.84
CLSTN3-207ENST00000537408 NINQ8N4C6 2090 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 DUXAA6NLW8 204 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF736B4DX44 427 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF888P0CJ79 500 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 GZMBP10144 247 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 LIPCP11150 499 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 HLA-GP17693 338 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 TBPP20226 339 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SSR2P43308 183 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ID4P47928 161 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SUCLG1P53597 346 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 MIDNQ504T8 468 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 NCR3LG1Q68D85 454 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 WDR5BQ86VZ2 330 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 NRSN1Q8IZ57 195 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 RNASEH2CQ8TDP1 164 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 CORO2AQ92828 525 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 MUCL1Q96DR8 90 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 APOBEC3BQ9UH17 382 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 OR52A1Q9UKL2 312 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SHISA7A6NL88 538 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF354AO60765 605 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 TRGC1P0CF51 173 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 KHKP50053 298 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SCAND1P57086 179 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 FBXW4P57775 412 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 LSM11P83369 360 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 PDE7AQ13946 482 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 HERPUD1Q15011 391 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 BATFQ16520 125 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 YOD1Q5VVQ6 348 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 DND1Q8IYX4 353 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SYS1Q8N2H4 156 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 LMNTD1Q8N9Z9 388 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 MFSD9Q8NBP5 474 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 LFNGQ8NES3 379 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 NAT6Q93015 286 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 INSM2Q96T92 566 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 NMES1Q9C002 83 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 PRSS16Q9NQE7 514 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 CBY3A6NI87 242 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 A6NNC1 897 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 RAB27BO00194 218 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 RCBTB2O95199 551 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 GPANK1O95872 356 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 GIMD1P0DJR0 217 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 MPC1LP0DKB6 136 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 CD37P11049 281 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 PPICP45877 212 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 HSPB3Q12988 150 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 OR5I1Q13606 314 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 GAS6Q14393 721 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 DECR1Q16698 335 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SUN3Q8TAQ9 357 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SFXN5Q8TD22 340 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 OIT3Q8WWZ8 545 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 AIF1LQ9BQI0 150 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 GSX1Q9H4S2 264 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 DKKL1Q9UK85 242 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF281Q9Y2X9 895 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 APC2O95996 2303 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 K7EPK0 472 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF85Q03923 595 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 TRA2AQ13595 282 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM71E2Q8N5Q1 922 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 OR5K2Q8NHB8 316 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 CD180Q99467 661 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SLCO5A1Q9H2Y9 848 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 SOHLH2Q9NX45 425 aa9.82□□□□□ -0.84
CLSTN3-207ENST00000537408 TCF20Q9UGU0 1960 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 IGLV3-10A0A075B6K4 115 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 M0QYG6 137 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 PNPP00491 289 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 CST4P01036 141 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 CSN2P05814 226 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 GUCA2AQ02747 115 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM71E1Q6IPT2 247 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 FRRS1Q6ZNA5 592 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC16A14Q7RTX9 510 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 MRPL41Q8IXM3 137 aaKnown RBP9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 TMEM183AQ8IXX5 376 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM185AQ8N0U4 392 aa9.81□□□□□ -0.84
CLSTN3-207ENST00000537408 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms