RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TMEM100Q9NV29 134 aa13.41□□□□□ -0.26
PTPRU-210ENST00000527027 COA3Q9Y2R0 106 aaPredicted RBP13.41□□□□□ -0.26
PTPRU-210ENST00000527027 A0A087WUU8 490 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 A0A1B0GWJ7 208 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 IQCF6A8MYZ5 107 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 FFAR1O14842 300 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 RER1O15258 196 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 SLC16A7O60669 478 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 GATA4P43694 442 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 COQ5Q5HYK3 327 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 ZNF730Q6ZMV8 503 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 ZNF620Q6ZNG0 422 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 TMPRSS11FQ6ZWK6 438 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 FAM122BQ7Z309 247 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 ZNF570Q96NI8 536 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 PCGF1Q9BSM1 259 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 RERGLQ9H628 205 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 ARMCX1Q9P291 453 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 SNX13Q9Y5W8 968 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 POMT1Q9Y6A1 747 aa13.4□□□□□ -0.26
PTPRU-210ENST00000527027 A0A0G2JND7 137 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 C22orf46C9J442 243 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 J3KTA2 159 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 P2RY10O00398 339 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 CDC42EP2O14613 210 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 TNFRSF13BO14836 293 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-210ENST00000527027 ENSAO43768 121 aaKnown RBP13.39□□□□□ -0.27
PTPRU-210ENST00000527027 IFNW1P05000 195 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 MELTFP08582 738 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 IRF2P14316 349 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 SELEP16581 610 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 ZNF26P17031 533 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-210ENST00000527027 FPR3P25089 353 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 KRTAP10-3P60369 221 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 RPL15P61313 204 aaKnown RBP13.39□□□□□ -0.27
PTPRU-210ENST00000527027 PDCD1Q15116 288 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 CD276Q5ZPR3 534 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 RUSC1-AS1Q66K80 236 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 TBPL2Q6SJ96 375 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 MBOAT2Q6ZWT7 520 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 CPLX4Q7Z7G2 160 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 BHLHE23Q8NDY6 225 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 GJC3Q8NFK1 279 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 ERGIC1Q969X5 290 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 HCAR1Q9BXC0 346 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 NDEL1Q9GZM8 345 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 SYT4Q9H2B2 425 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 NMNAT1Q9HAN9 279 aaPredicted RBP13.39□□□□□ -0.27
PTPRU-210ENST00000527027 MRGBPQ9NV56 204 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 KIF17Q9P2E2 1029 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 DOCK11Q5JSL3 2073 aa13.39□□□□□ -0.27
PTPRU-210ENST00000527027 FAM220BPB1ANY3 271 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 ZNF879B4DU55 563 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 MRASO14807 208 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 HLA-DPB1P04440 258 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 LIPFP07098 398 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 CFHR2P36980 270 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 PSMB10P40306 273 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 GPR4P46093 362 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 NPY4RP50391 375 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 HIST1H3AP68431 136 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 MAB21L1Q13394 359 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
PTPRU-210ENST00000527027 HIST2H3PS2Q5TEC6 136 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 GPR139Q6DWJ6 353 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 ASPHD2Q6ICH7 369 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 HIST2H3AQ71DI3 136 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 RRM2BQ7LG56 351 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 OR2T12Q8NG77 320 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 OR11L1Q8NGX0 322 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 TBC1D15Q8TC07 691 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 Q8TCH9 128 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 SSMEM1Q8WWF3 244 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 COQ7Q99807 217 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 PKP2Q99959 881 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 RBM4BQ9BQ04 359 aaKnown RBP13.38□□□□□ -0.27
PTPRU-210ENST00000527027 HDHD2Q9H0R4 259 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 WDR76Q9H967 626 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 VSX1Q9NZR4 365 aaPredicted RBP13.38□□□□□ -0.27
PTPRU-210ENST00000527027 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
PTPRU-210ENST00000527027 CENPVL3A0A0U1RRI6 287 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 ELOVL7A1L3X0 281 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 TOX4O94842 621 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 SFTPBP07988 381 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 MMP9P14780 707 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 SDHAP31040 664 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 GYS2P54840 703 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 RSPO1Q2MKA7 263 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-210ENST00000527027 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 C19orf18Q8NEA5 215 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 LINC01006Q8NI28 216 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 DYRK2Q92630 601 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 UBE2FQ969M7 185 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 TECTBQ96PL2 329 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 NUAK2Q9H093 628 aa13.37□□□□□ -0.27
PTPRU-210ENST00000527027 NRIP3Q9NQ35 241 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms