RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 CACNG2Q9Y698 323 aa2.86□□□□□ -1.95
CD44-223ENST00000526553 LMTK2Q8IWU2 1503 aa2.86□□□□□ -1.95
CD44-223ENST00000526553 CENPJQ9HC77 1338 aaPredicted RBP2.86□□□□□ -1.95
CD44-223ENST00000526553 CAMTA1Q9Y6Y1 1673 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 DAPK1P53355 1430 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 NWD2Q9ULI1 1742 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 BCL9LQ86UU0 1499 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 GABRR3A8MPY1 467 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SERPINE3A8MV23 424 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SMKR1H3BMG3 65 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 BOLA2-SMG1P6H3BVE0 249 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 DPM1O60762 260 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 ICOSLGO75144 302 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 HSBP1O75506 76 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 AQP8O94778 261 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CD160O95971 181 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 HBE1P02100 147 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 BGLAPP02818 100 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 IFNW1P05000 195 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 S100A9P06702 114 aaKnown RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 DCNP07585 359 aaKnown RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 CLTAP09496 248 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CTRB1P17538 263 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 HRH1P35367 487 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 NUDT1P36639 197 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SLC1A2P43004 574 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 BCAP31P51572 246 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CARD18P57730 90 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SMARCB1Q12824 385 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 QPRTQ15274 297 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 TMEM255AQ5JRV8 349 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 TEX43Q6ZNM6 134 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 FAM71E2Q8N5Q1 922 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 OR5T3Q8NGG3 340 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 OR52E5Q8NH55 327 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 NUBPLQ8TB37 319 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 MITD1Q8WV92 249 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 NAT6Q93015 286 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CIDECQ96AQ7 238 aaPredicted RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 FAM3DQ96BQ1 224 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SEH1LQ96EE3 360 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CERS2Q96G23 380 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 PARP12Q9H0J9 701 aaKnown RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 CLN6Q9NWW5 311 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 ZNF226Q9NYT6 803 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 SLC25A37Q9NYZ2 338 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 ZNF629Q9UEG4 869 aaPredicted RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 PCYOX1Q9UHG3 505 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 PRG3Q9Y2Y8 225 aaPredicted RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 RHBDD3Q9Y3P4 386 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 WSB1Q9Y6I7 421 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 ASTN1O14525 1302 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 NRXN3Q9Y4C0 1643 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 CEMIPQ8WUJ3 1361 aa2.85□□□□□ -1.95
CD44-223ENST00000526553 TNS1Q9HBL0 1735 aaKnown RBP2.85□□□□□ -1.95
CD44-223ENST00000526553 LAMC1P11047 1609 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 USP32Q8NFA0 1604 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 TRAV6A0A075B6T7 132 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 TSPAN11A1L157 253 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 PRSS37A4D1T9 235 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 A6NDN8 102 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 PES1O00541 588 aaKnown RBP2.84□□□□□ -1.95
CD44-223ENST00000526553 BCKDKO14874 412 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 NUPL2O15504 423 aaKnown RBP2.84□□□□□ -1.95
CD44-223ENST00000526553 XRCC2O43543 280 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 TNFSF13O75888 250 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 UTS2O95399 124 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 INSP01308 110 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ARG1P05089 322 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 RHOXF2BP0C7M4 288 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 RAB3BP20337 219 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 WARSP23381 471 aaKnown RBP2.84□□□□□ -1.95
CD44-223ENST00000526553 OR1E1P30953 314 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 C1QTNF8P60827 252 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 MXD1Q05195 221 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 KCTD19Q17RG1 926 aaPredicted RBP2.84□□□□□ -1.95
CD44-223ENST00000526553 TTLL9Q3SXZ7 439 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ULK3Q6PHR2 472 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 MBOAT1Q6ZNC8 495 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ACP7Q6ZNF0 438 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 C6orf120Q7Z4R8 191 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 MYOCDQ8IZQ8 938 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 CMTM8Q8IZV2 173 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ARIH2OSQ8N7S6 290 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 OR56A4Q8NGH8 313 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 OR4S2Q8NH73 311 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ACER1Q8TDN7 264 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 CD300LFQ8TDQ1 290 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 GIMAP1Q8WWP7 306 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 RDH5Q92781 318 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 EEF1AKMT3Q96AZ1 226 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 FAM210BQ96KR6 192 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 OR2M2Q96R28 347 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 RHOXF2Q9BQY4 288 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 SLC7A5P2Q9GIP4 190 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 RETNQ9HD89 108 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 KCNJ16Q9NPI9 418 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 DYRK4Q9NR20 520 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 ZNF225Q9UK10 706 aa2.84□□□□□ -1.95
CD44-223ENST00000526553 HEBP2Q9Y5Z4 205 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms