RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 RPL4P36578 427 aaKnown RBP18.86■□□□□ 0.61
PVT1-218ENST00000523328 PROK1P58294 105 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 MAB21L1Q13394 359 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 LRRC23Q53EV4 343 aaPredicted RBP18.86■□□□□ 0.61
PVT1-218ENST00000523328 AGBL2Q5U5Z8 902 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 C1QL4Q86Z23 238 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 Q8TCH9 128 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 TPD52L3Q96J77 140 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 ZNF570Q96NI8 536 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 CTSZQ9UBR2 303 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 COA3Q9Y2R0 106 aaPredicted RBP18.86■□□□□ 0.61
PVT1-218ENST00000523328 SNX13Q9Y5W8 968 aa18.86■□□□□ 0.61
PVT1-218ENST00000523328 SLC22A31A6NKX4 558 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 ZNF879B4DU55 563 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 J3KTA2 159 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 IMPA2O14732 288 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 FFAR1O14842 300 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 TSPAN15O95858 294 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 FPR3P25089 353 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 IFNA8P32881 189 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 KDELR2P33947 212 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 YAP1P46937 504 aaKnown RBP18.85■□□□□ 0.61
PVT1-218ENST00000523328 SELENOWP63302 87 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 CLEC12AQ5QGZ9 265 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 GLB1L2Q8IW92 636 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 SYT4Q9H2B2 425 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 WDR76Q9H967 626 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 TMEM100Q9NV29 134 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 TMCC3Q9ULS5 477 aa18.85■□□□□ 0.61
PVT1-218ENST00000523328 A0A087WUU8 490 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 GPR137BO60478 399 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 SLC16A7O60669 478 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 KHDRBS3O75525 346 aaKnown RBP18.84■□□□□ 0.61
PVT1-218ENST00000523328 TOX4O94842 621 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 GPR4P46093 362 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 NPY4RP50391 375 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 RAD23AP54725 363 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 HIST1H3AP68431 136 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 HOXA4Q00056 320 aaPredicted RBP18.84■□□□□ 0.61
PVT1-218ENST00000523328 TRAM2Q15035 370 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 ZBED5Q49AG3 693 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 HIST2H3PS2Q5TEC6 136 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 TBPL2Q6SJ96 375 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 HIST2H3AQ71DI3 136 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 RNF113BQ8IZP6 322 aaKnown RBP18.84■□□□□ 0.61
PVT1-218ENST00000523328 CELF2-AS1Q8N7Q2 184 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 TBC1D15Q8TC07 691 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 GATAD2BQ8WXI9 593 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 ERGIC1Q969X5 290 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 RERGLQ9H628 205 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 ACOXLQ9NUZ1 547 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 KIF17Q9P2E2 1029 aa18.84■□□□□ 0.61
PVT1-218ENST00000523328 FAM20BO75063 409 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 IGHV4-59P01825 116 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 LIPFP07098 398 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 IRF2P14316 349 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 PRSS12P56730 875 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 KRR1Q13601 381 aaKnown RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 KCNMB1Q16558 191 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 RSPO1Q2MKA7 263 aaPredicted RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 BEND6Q5SZJ8 279 aaPredicted RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 COLCA1Q6ZS62 124 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 TMPRSS11FQ6ZWK6 438 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 ACOT11Q8WXI4 607 aaPredicted RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 WDFY2Q96P53 400 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 TECTBQ96PL2 329 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 COQ7Q99807 217 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 FNDC11Q9BVV2 318 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 NMNAT1Q9HAN9 279 aaPredicted RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 VSX1Q9NZR4 365 aaPredicted RBP18.83■□□□□ 0.6
PVT1-218ENST00000523328 ZNF281Q9Y2X9 895 aa18.83■□□□□ 0.6
PVT1-218ENST00000523328 CD200P41217 278 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 MPPED2Q15777 294 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 PRAMEF6Q5VXH4 476 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 CD276Q5ZPR3 534 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 MBOAT2Q6ZWT7 520 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 OR11L1Q8NGX0 322 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 DYDC1Q8WWB3 177 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 HDHD2Q9H0R4 259 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 SIRPDQ9H106 197 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 TCF7L1Q9HCS4 588 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 UFSP2Q9NUQ7 469 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 LHFPL6Q9Y693 200 aa18.82■□□□□ 0.6
PVT1-218ENST00000523328 IGHV1-69DA0A0B4J2H0 117 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 FAM220BPB1ANY3 271 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 IGHV1-69P01742 117 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 SDHAP31040 664 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 IER3P46695 156 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 ZNF730Q6ZMV8 503 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 VTCN1Q7Z7D3 282 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 LDLRAD3Q86YD5 345 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 GJC3Q8NFK1 279 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 HCAR1Q9BXC0 346 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 TRIM15Q9C019 465 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 NUAK2Q9H093 628 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 MMADHCQ9H3L0 296 aaPredicted RBP18.81■□□□□ 0.6
PVT1-218ENST00000523328 SMURF1Q9HCE7 757 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 NRIP3Q9NQ35 241 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 ERVK-18Q9QC07 812 aa18.81■□□□□ 0.6
PVT1-218ENST00000523328 NPPAP01160 153 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms