RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 LYVE1Q9Y5Y7 322 aa17.44■□□□□ 0.38
SDCBP-209ENST00000522243 A0A0A6YYJ9 748 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 B2RBV5 119 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 J3QLI3 93 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 HAX1O00165 279 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 IDH3BO43837 385 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 FOXH1O75593 365 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 RPS27P42677 84 aaKnown RBP17.43■□□□□ 0.38
SDCBP-209ENST00000522243 SEC61A1P61619 476 aaKnown RBP17.43■□□□□ 0.38
SDCBP-209ENST00000522243 BTG1P62324 171 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 SCGB2A2Q13296 93 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 ZMYND11Q15326 602 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 LRRC28Q86X40 367 aaPredicted RBP17.43■□□□□ 0.38
SDCBP-209ENST00000522243 KLHL36Q8N4N3 616 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 TEX29Q8N6K0 151 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 CYB561A3Q8NBI2 242 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 OR52L1Q8NGH7 329 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 OR13G1Q8NGZ3 307 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 MEGF10Q96KG7 1140 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 ZNF582Q96NG8 517 aaPredicted RBP17.43■□□□□ 0.38
SDCBP-209ENST00000522243 PLA2G12AQ9BZM1 189 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 PATZ1Q9HBE1 687 aaKnown RBP17.43■□□□□ 0.38
SDCBP-209ENST00000522243 GCM1Q9NP62 436 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 MMP26Q9NRE1 261 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 ACTR3BQ9P1U1 418 aa17.43■□□□□ 0.38
SDCBP-209ENST00000522243 WNK2Q9Y3S1 2297 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 TVP23AA6NH52 213 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 TMEM178BH3BS89 294 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 MLNRO43193 412 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 KRT36O76013 467 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 ZNF205O95201 554 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 CYB5R3P00387 301 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-209ENST00000522243 GASTP01350 101 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 ACSM4P0C7M7 580 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 GGT2P36268 569 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 MMP16P51512 607 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 HMGA2P52926 109 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 SPATS1Q496A3 300 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 TMEM155Q4W5P6 130 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 SPICQ8N5J4 248 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 FITM2Q8N6M3 262 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 NANPQ8TBE9 248 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 ZNRF4Q8WWF5 429 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 ATF6BQ99941 703 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 PNRC2Q9NPJ4 139 aaKnown RBP17.42■□□□□ 0.38
SDCBP-209ENST00000522243 OPN4Q9UHM6 478 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 CYB5R1Q9UHQ9 305 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 CDH10Q9Y6N8 788 aa17.42■□□□□ 0.38
SDCBP-209ENST00000522243 TCRBV5S2A0A599 114 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 IQCF6A8MYZ5 107 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 F5H5P2 479 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 LCATP04180 440 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 HLA-DPB1P04440 258 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 SELEP16581 610 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 GATA3P23771 443 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 TRAP1Q12931 704 aaKnown RBP17.41■□□□□ 0.38
SDCBP-209ENST00000522243 KRTAP27-1Q3LI81 207 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 SLC27A4Q6P1M0 643 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 LYPD4Q6UWN0 246 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 COLCA1Q6ZS62 124 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 OR51L1Q8NGJ5 315 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 OR4C15Q8NGM1 316 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 OR8D4Q8NGM9 314 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 C22orf15Q8WYQ4 148 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 NSL1Q96IY1 281 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 MAP6Q96JE9 813 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 DDOQ99489 341 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 SLC30A2Q9BRI3 323 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 HCAR1Q9BXC0 346 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 C1QTNF5Q9BXJ0 243 aa17.41■□□□□ 0.38
SDCBP-209ENST00000522243 STAB1Q9NY15 2570 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 BHLHE40O14503 412 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 CCNB2O95067 398 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 ZNF823P16415 610 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 SRP9P49458 86 aaKnown RBP17.4■□□□□ 0.38
SDCBP-209ENST00000522243 MNAT1P51948 309 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 ECH1Q13011 328 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 RPL13AP3Q6NVV1 102 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 MOGAT3Q86VF5 341 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 PROKR2Q8NFJ6 384 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 OR9Q1Q8NGQ5 310 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 SLCO4A1Q96BD0 722 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 CCT8L2Q96SF2 557 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 SLC6A7Q99884 636 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 TBC1D23Q9NUY8 699 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 VNN3Q9NY84 501 aa17.4■□□□□ 0.38
SDCBP-209ENST00000522243 FBN3Q75N90 2809 aa17.39■□□□□ 0.38
SDCBP-209ENST00000522243 TRAPPC2LH3BP13 241 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 PSKH1P11801 424 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 MDH2P40926 338 aaKnown RBP17.39■□□□□ 0.37
SDCBP-209ENST00000522243 MAGEA2P43356 314 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 SLC6A9P48067 706 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 HILS1P60008 231 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 MS4A2Q01362 244 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 GK2Q14410 553 aaPredicted RBP17.39■□□□□ 0.37
SDCBP-209ENST00000522243 ZNF770Q6IQ21 691 aaPredicted RBP17.39■□□□□ 0.37
SDCBP-209ENST00000522243 C12orf54Q6X4T0 127 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 RASSF6Q6ZTQ3 369 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 AQP11Q8NBQ7 271 aa17.39■□□□□ 0.37
SDCBP-209ENST00000522243 SLC37A3Q8NCC5 494 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms