RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 LOC105371242A0A075B767 164 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 A0A1W2PQF6 199 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 OR6C76A6NM76 312 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 SGK494L7N484 410 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 EMC8O43402 210 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 NME6O75414 186 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 HMGN2P05204 90 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 UCHL1P09936 223 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 F3P13726 295 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 MMP11P24347 488 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 ARL3P36405 182 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 PNLIPRP2P54317 469 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 NKX6-1P78426 367 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 SLC48A1Q6P1K1 146 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 PODNL1Q6PEZ8 512 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 C6orf15Q6UXA7 325 aaPredicted RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 UNQ9370/PRO34162Q6UXP9 181 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 CD300LDQ6UXZ3 194 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB42Q8N4Z0 105 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 SFXN5Q8TD22 340 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 GPR148Q8TDV2 347 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 PINX1Q96BK5 328 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 TAAR9Q96RI9 348 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 ZNF607Q96SK3 696 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 GABRG3Q99928 467 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 NTMQ9P121 344 aa6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 EXOSC1Q9Y3B2 195 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-219ENST00000514743 ANKRD20A5PA0PJZ0 165 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 CSO75390 466 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 UBBP0CG47 229 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 C8orf89P0DMQ9 161 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 CCL2P13500 99 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 MAS1LP35410 378 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 SOX18P35713 384 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 ID1P41134 155 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 CTBP2P56545 445 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 ERVFRD-1P60508 538 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 RPS27AP62979 156 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 UBA52P62987 128 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 HTR4Q13639 388 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NFATC4Q14934 902 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 ITPRIPL2Q3MIP1 535 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NKAPLQ5M9Q1 402 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 GFI1BQ5VTD9 330 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 CNIH2Q6PI25 160 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 MOB3CQ70IA8 216 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 MRPL21Q7Z2W9 205 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 VN1R4Q7Z5H5 301 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 PPP1R35Q8TAP8 253 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 GHSRQ92847 366 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 RPUSD4Q96CM3 377 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 C6orf106Q9H6K1 298 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 GPN1Q9HCN4 374 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 HHATLQ9HCP6 504 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 HAO2Q9NYQ3 351 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NPTNQ9Y639 398 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 VCANP13611 3396 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 ARHGEF17Q96PE2 2063 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 EIF1AYO14602 144 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NTN1O95631 604 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 IL18BPO95998 194 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 HOXB2P14652 356 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 SRMP19623 302 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 SDC2P34741 201 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 GAS1P54826 345 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 WNT4P56705 351 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 HSF1Q00613 529 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 JOSD1Q15040 202 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NTRK2Q16620 822 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM184AQ6ZMB5 413 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NUFIP2Q7Z417 695 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 FAM24BQ8N5W8 94 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 NANOS1Q8WY41 292 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 BCL2L2Q92843 193 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 ZG16BQ96DA0 208 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 MALSU1Q96EH3 234 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 C5orf30Q96GV9 206 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 S100A13Q99584 98 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 PLA2G12AQ9BZM1 189 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 CLN6Q9NWW5 311 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 FBXW2Q9UKT8 454 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 POMT1Q9Y6A1 747 aa6.73□□□□□ -1.33
PDLIM5-219ENST00000514743 PRSS38A1L453 326 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TRAPPC13A5PLN9 417 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 FBLL1A6NHQ2 334 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 C9J4A7 227 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 KLRC4-KLRK1H3BQV0 150 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 BHLHE40O14503 412 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 AGPAT2O15120 278 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 SOD3P08294 240 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 GLB1P16278 677 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 MPZP25189 248 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 NTSP30990 170 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TSFMP43897 325 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB8AP61006 207 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 CDK5Q00535 292 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 UBE2V1Q13404 147 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 RAB11BQ15907 218 aa6.72□□□□□ -1.33
PDLIM5-219ENST00000514743 TMEM244Q5VVB8 128 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms