RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PIK3IP1Q96FE7 263 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 DNAJB12Q9NXW2 375 aaKnown RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 CD207Q9UJ71 328 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 A0A1W2PPE3 182 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 WRBO00258 174 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 SOX1O00570 391 aaPredicted RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 YKT6O15498 198 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 HCRTR1O43613 425 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 OR13C7P0DN81 318 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 ZNF44P15621 663 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 OR3A2P47893 321 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 LPCAT3Q6P1A2 487 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 ZNF529Q6P280 563 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 CLEC9AQ6UXN8 241 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 ZNF679Q8IYX0 411 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 UNC80Q8N2C7 3258 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 SLC43A2Q8N370 569 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 C19orf47Q8N9M1 422 aaKnown RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 NECAB3Q96P71 396 aaPredicted RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 MAP3K3Q99759 626 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 TCEAL7Q9BRU2 100 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 LRIT1Q9P2V4 623 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 KLF2Q9Y5W3 355 aaPredicted RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 FANCMQ8IYD8 2048 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 S1PR1P21453 382 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 ACAA2P42765 397 aaKnown RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 RASGEF1BQ0VAM2 473 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 HABP2Q14520 560 aaPredicted RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 SSX9Q7RTT3 188 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 OR4A4PQ8NGN8 299 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 RHOVQ96L33 236 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 AMELYQ99218 206 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 GPER1Q99527 375 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 LMF2Q9BU23 707 aaKnown RBP8.67□□□□□ -1.02
VCAN-210ENST00000513960 SEC11CQ9BY50 192 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 FAM117AQ9C073 453 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 TAF9BQ9HBM6 251 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 MMP17Q9ULZ9 603 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 PCDHGA1Q9Y5H4 931 aa8.67□□□□□ -1.02
VCAN-210ENST00000513960 RANBP2P49792 3224 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 SPTY2D1-AS1A0A0U1RR47 76 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 EFCAB7A8K855 629 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SLC16A7O60669 478 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 ITGB2P05107 769 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 GNB3P16520 340 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 PRPS1P60891 318 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SGCAQ16586 387 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 RPL7L1Q6DKI1 246 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 CORO6Q6QEF8 472 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 RCBTB1Q8NDN9 531 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MFSD8Q8NHS3 518 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 GAL3ST4Q96RP7 486 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 PAPOLGQ9BWT3 736 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 POLR1DQ9Y2S0 133 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 FBXO7Q9Y3I1 522 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SPAG17Q6Q759 2223 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 A0A0A6YYH2 397 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 A6NJ64 397 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 OR4C45A6NMZ5 311 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 EIF4E2O60573 245 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 YIF1AO95070 293 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 SKP2Q13309 424 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 KIAA0141Q14154 515 aaPredicted RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 ZNF674Q2M3X9 581 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 VWA2Q5GFL6 755 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 KIAA0895LQ68EN5 471 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 ZNF561Q8N587 486 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 GPX8Q8TED1 209 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 KLHDC7BQ96G42 594 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 PIGQQ9BRB3 760 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 TWSG1Q9GZX9 223 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 AMDHD2Q9Y303 409 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SDK1Q7Z5N4 2213 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MSGN1A6NI15 193 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SLC17A2O00624 439 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 EIF1BO60739 113 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 TXNDC12O95881 172 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 IGKV1D-16P01601 117 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 CTSBP07858 339 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 CD14P08571 375 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 RNF224P0DH78 156 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 EIF1P41567 113 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 CAMLGP49069 296 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 RIDAP52758 137 aaKnown RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 CLDN6P56747 220 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MEF2DQ14814 521 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 AWAT1Q58HT5 328 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SLC35D3Q5M8T2 416 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 SKA3Q8IX90 412 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 ZNF595Q8IYB9 648 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 PRR22Q8IZ63 422 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 TMEM229BQ8NBD8 167 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 MMABQ96EY8 250 aaPredicted RBP8.66□□□□□ -1.02
VCAN-210ENST00000513960 KIRREL1Q96J84 757 aa8.66□□□□□ -1.02
VCAN-210ENST00000513960 JSRP1Q96MG2 331 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms