RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 CDK5R2Q13319 367 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 HFEQ30201 348 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 FAM209AQ5JX71 171 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 OR2T2Q6IF00 324 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 OR2T4Q8NH00 348 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 APOBEC3DQ96AK3 386 aaPredicted RBP11.26□□□□□ -0.61
RNF4-215ENST00000511843 SLCO4A1Q96BD0 722 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 OTULINQ96BN8 352 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 ELMOD3Q96FG2 381 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 ATF6BQ99941 703 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 CADM1Q9BY67 442 aaKnown RBP11.26□□□□□ -0.61
RNF4-215ENST00000511843 CYSLTR2Q9NS75 346 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 TMEM160Q9NX00 188 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 ATPIF1Q9UII2 106 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 ZDHHC8Q9ULC8 765 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 COMMD3-BMI1R4GMX3 469 aa11.26□□□□□ -0.61
RNF4-215ENST00000511843 MXRA5Q9NR99 2828 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 TCRBV3S1A0A5B6 114 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 H0YL77 283 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 H3BN98 237 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 GSC2O15499 205 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 E2F6O75461 281 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 CD55P08174 381 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 ADH4P08319 380 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 SPARCP09486 303 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 ZNF823P16415 610 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 POU1F1P28069 291 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 LIPAP38571 399 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 RGS6P49758 472 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
RNF4-215ENST00000511843 BNIP1Q12981 228 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 KRTAP27-1Q3LI81 207 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 FBXW12Q6X9E4 464 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 SPATC1Q76KD6 591 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 OR10AD1Q8NGE0 317 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 OR6K6Q8NGW6 343 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 PTP4A1Q93096 173 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 POP5Q969H6 163 aaKnown RBP11.25□□□□□ -0.61
RNF4-215ENST00000511843 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 DCLRE1CQ96SD1 692 aaKnown RBP11.25□□□□□ -0.61
RNF4-215ENST00000511843 NMNAT2Q9BZQ4 307 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 EGLN1Q9GZT9 426 aa11.25□□□□□ -0.61
RNF4-215ENST00000511843 ISPDA4D126 451 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 RIIAD1A6NNX1 92 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 TIPRLO75663 272 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 LCATP04180 440 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 RAC2P15153 192 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 SRD5A1P18405 259 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 ZMAT1Q5H9K5 638 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 ACSM5Q6NUN0 579 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 COLCA1Q6ZS62 124 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 DCXRQ7Z4W1 244 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 OR5L1Q8NGL2 311 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 COG8Q96MW5 612 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 C1QTNF5Q9BXJ0 243 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 ZNF665Q9H7R5 613 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 CMC2Q9NRP2 79 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 LPAR3Q9UBY5 353 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 CGGBP1Q9UFW8 167 aaPredicted RBP11.24□□□□□ -0.61
RNF4-215ENST00000511843 BAIAP2Q9UQB8 552 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 WNK2Q9Y3S1 2297 aa11.24□□□□□ -0.61
RNF4-215ENST00000511843 ARRDC5A6NEK1 342 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 B4DSR2 109 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 M0R135 149 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
RNF4-215ENST00000511843 MLNRO43193 412 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 IFNGP01579 166 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 HLA-DPB1P04440 258 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 MSMBP08118 114 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 TUBG1P23258 451 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 FMO3P31513 532 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 GRK5P34947 590 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 SLC6A9P48067 706 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 ENTPD1P49961 510 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 SLC25A1P53007 311 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 ECH1Q13011 328 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 GK2Q14410 553 aaPredicted RBP11.23□□□□□ -0.61
RNF4-215ENST00000511843 SNAI3Q3KNW1 292 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 LINC01590Q5TEZ4 76 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 TMEM236Q5W0B7 351 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 GLCCI1Q86VQ1 547 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 ATG16L2Q8NAA4 619 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
RNF4-215ENST00000511843 OR2AE1Q8NHA4 323 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 SLAMF6Q96DU3 332 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 DIRC2Q96SL1 478 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 GAL3ST1Q99999 423 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 TUBG2Q9NRH3 451 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 CENPMQ9NSP4 180 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 UBAP1Q9NZ09 502 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 DNAJB9Q9UBS3 223 aa11.23□□□□□ -0.61
RNF4-215ENST00000511843 TMEFF2Q9UIK5 374 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms