RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ZNF610Q8N9Z0 462 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 RELL2Q8NC24 303 aaPredicted RBP9.06□□□□□ -0.96
TPM3-217ENST00000504663 ST6GALNAC3Q8NDV1 305 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 CPEB3Q8NE35 698 aaKnown RBP9.06□□□□□ -0.96
TPM3-217ENST00000504663 GJC3Q8NFK1 279 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 OR8B12Q8NGG6 310 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 OR2AJ1Q8NGZ0 328 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 AKR7LQ8NHP1 331 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 ABHD4Q8TB40 342 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 WBP1Q96G27 269 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 GFI1Q99684 422 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 COQ7Q99807 217 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 ATF6BQ99941 703 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 SOX7Q9BT81 388 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 WACQ9BTA9 647 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 CDADC1Q9BWV3 514 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 BARHL1Q9BZE3 327 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 SLIRPQ9GZT3 109 aaKnown RBP9.06□□□□□ -0.96
TPM3-217ENST00000504663 DCSTAMPQ9H295 470 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 CENPMQ9NSP4 180 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 UPB1Q9UBR1 384 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 Q9UFV3 132 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 NUFIP1Q9UHK0 495 aaKnown RBP9.06□□□□□ -0.96
TPM3-217ENST00000504663 ATPIF1Q9UII2 106 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 OR52A1Q9UKL2 312 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 SLC5A6Q9Y289 635 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 ZNF281Q9Y2X9 895 aa9.06□□□□□ -0.96
TPM3-217ENST00000504663 RTTNQ86VV8 2226 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 TMEM212A6NML5 194 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SGCEO43556 437 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 DOK2O60496 412 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 HLA-DPB1P04440 258 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ISG15P05161 165 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ACSM4P0C7M7 580 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 CCL1P22362 96 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 CCKARP32238 428 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 CX3CR1P49238 355 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 PRKXP51817 358 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ZNF121P58317 390 aaPredicted RBP9.05□□□□□ -0.96
TPM3-217ENST00000504663 GRB2P62993 217 aaKnown RBP9.05□□□□□ -0.96
TPM3-217ENST00000504663 TUBA1BP68363 451 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SCRN3Q0VDG4 424 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SF3B4Q15427 424 aaKnown RBP eCLIP9.05□□□□□ -0.961e-13■■□□□ 12.6
TPM3-217ENST00000504663 TRAM1Q15629 374 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 EIF2S3LQ2VIR3 472 aaKnown RBP9.05□□□□□ -0.96
TPM3-217ENST00000504663 YIF1BQ5BJH7 314 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ZMAT1Q5H9K5 638 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ANKRD16Q6P6B7 361 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SEZ6L2Q6UXD5 910 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 TUBA1AQ71U36 451 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SLC16A14Q7RTX9 510 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 LIX1LQ8IVB5 337 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ELMOD2Q8IZ81 293 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 UBE2J2Q8N2K1 259 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 WDR31Q8NA23 367 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 OR1F12Q8NHA8 337 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 ORAI1Q96D31 301 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 LYZL4Q96KX0 146 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 DERL3Q96Q80 235 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 OR14A2Q96R54 314 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 MYCBPQ99417 103 aaPredicted RBP9.05□□□□□ -0.96
TPM3-217ENST00000504663 KCNJ15Q99712 375 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 MED18Q9BUE0 208 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SFXN3Q9BWM7 321 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 NXF2Q9GZY0 626 aaKnown RBP9.05□□□□□ -0.96
TPM3-217ENST00000504663 PBOV1Q9GZY1 135 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 HDHD2Q9H0R4 259 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 NIPAL2Q9H841 368 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 MOB1AQ9H8S9 216 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 JKAMPQ9P055 326 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 SSR3Q9UNL2 185 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 KALRNO60229 2985 aa9.05□□□□□ -0.96
TPM3-217ENST00000504663 LOC100509620A0A075B734 347 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ARPC4-TTLL3A0A0A6YYG9 625 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 TMEM269A0A1B0GVZ9 245 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 LOC107986453A0A1B0GWG9 222 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ACOD1A6NK06 481 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 LOC110117498-PIK3R3F6TDL0 507 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 PRRG2O14669 202 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 LMX1BO60663 402 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 LYZL6O75951 148 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 KRT33AO76009 404 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 SLC2A1P11166 492 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 SFTPCP11686 197 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ACHEP22303 614 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 RPS19P39019 145 aaKnown RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 SERPINB10P48595 397 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 TSC22D1Q15714 1073 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ZNF829Q3KNS6 432 aaPredicted RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 SNAI3Q3KNW1 292 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ACSM3Q53FZ2 586 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 PABPC1L2AQ5JQF8 200 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 CEP78Q5JTW2 689 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 COLCA1Q6ZS62 124 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
TPM3-217ENST00000504663 ABHD12BQ7Z5M8 362 aaPredicted RBP9.04□□□□□ -0.96
TPM3-217ENST00000504663 CXorf67Q86X51 503 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms