RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TMEM27Q9HBJ8 222 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 HYPKQ9NX55 129 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 DUX4Q9UBX2 424 aa1.04□□□□□ -2.24
SMAD1-203ENST00000502342 SMIM26A0A096LP01 95 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 LYRM9A8MSI8 78 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 H7C417 338 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 GLSO94925 669 aaPredicted RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ASGR1P07306 291 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ANXA5P08758 320 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 NCF2P19878 526 aaPredicted RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 MPV17P39210 176 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 IDH2P48735 452 aaKnown RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 GFERP55789 205 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 STXBP1P61764 594 aaKnown RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 CHIT1Q13231 466 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 DGCR6Q14129 220 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 MAD2L1BPQ15013 274 aaPredicted RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ZMYND11Q15326 602 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 RBMY1FQ15415 496 aaKnown RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 DEFB134Q4QY38 66 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 KLHL12Q53G59 568 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 PPM1LQ5SGD2 360 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 HCP5Q6MZN7 132 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 GUSBP11Q6P575 273 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ADM2Q7Z4H4 148 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 CDR2LQ86X02 465 aaPredicted RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ZNF101Q8IZC7 436 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ZCCHC7Q8N3Z6 543 aaKnown RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 NPWQ8N729 165 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 OR1J4Q8NGS1 313 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 TUBGCP3Q96CW5 907 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 GPR82Q96P67 336 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 ZBTB18Q99592 522 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 SEC22CQ9BRL7 303 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 TM2D3Q9BRN9 247 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 MARVELD1Q9BSK0 173 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 CSNK1G1Q9HCP0 422 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 SLC2A8Q9NY64 477 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 PSMC3IPQ9P2W1 217 aaPredicted RBP1.03□□□□□ -2.24
SMAD1-203ENST00000502342 MTFP1Q9UDX5 166 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 LGALS13Q9UHV8 139 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 SIGLEC7Q9Y286 467 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 STARD10Q9Y365 291 aa1.03□□□□□ -2.24
SMAD1-203ENST00000502342 IGHV3-72A0A0B4J1Y9 119 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 IGKV1-8A0A0C4DH67 115 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 SYCE1LA8MT33 242 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 SMKR1H3BMG3 65 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 RPN2P04844 631 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 PFN1P07737 140 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 ATF6P18850 670 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 GALR1P47211 349 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 HNMTP50135 292 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 UBE2E1P51965 193 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 CDH6P55285 790 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 TAS2R46P59540 309 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 EIF3EP60228 445 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 RPL23AP62750 156 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 BST1Q10588 318 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 BIKQ13323 160 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 DDX39BQ13838 428 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 NCF4Q15080 339 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 PPP1R7Q15435 360 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 TAF7Q15545 349 aaPredicted RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 UBE2UQ5VVX9 321 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 STUMQ69YW2 141 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 MED27Q6P2C8 311 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 PRSS54Q6PEW0 395 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 SASS6Q6UVJ0 657 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 C12orf54Q6X4T0 127 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 C16orf47Q6ZP98 133 aaPredicted RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 USP50Q70EL3 339 aaPredicted RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 PPP1R42Q7Z4L9 355 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 MDP1Q86V88 176 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 TEX9Q8N6V9 391 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 SNX31Q8N9S9 440 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 OR4M1Q8NGD0 313 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 OR10G6Q8NH81 332 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 APH1BQ8WW43 257 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 KIFAP3Q92845 792 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 HGDQ93099 445 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 ECHDC3Q96DC8 303 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 DUS3LQ96G46 650 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 CHCHD7Q9BUK0 85 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 MYOZ1Q9NP98 299 aaPredicted RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 MED4Q9NPJ6 270 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 HRASLS2Q9NWW9 162 aa1.02□□□□□ -2.25
SMAD1-203ENST00000502342 CSDC2Q9Y534 153 aaKnown RBP1.02□□□□□ -2.25
SMAD1-203ENST00000502342 TRIP11Q15643 1979 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 THADAQ6YHU6 1953 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 AKNAQ7Z591 1439 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 ARPC4-TTLL3A0A0A6YYG9 625 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 IGHV1-69DA0A0B4J2H0 117 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 A0A0J9YXV3 536 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 PRAMEF26H0Y7S4 382 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 CST1P01037 141 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 LHBP01229 141 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 IGLV7-43P04211 117 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 ARG1P05089 322 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 ZNF43P17038 809 aa1.01□□□□□ -2.25
SMAD1-203ENST00000502342 NTF3P20783 257 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms