RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 BPIFB2Q8N4F0 458 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 PIP4P2Q8N4L2 257 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 OR13C8Q8NGS7 320 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 LRRC20Q8TCA0 184 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 AQP3Q92482 292 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 FAM46BQ96A09 425 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 PTX4Q96A99 478 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 MRGPRX4Q96LA9 322 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SPSB2Q99619 263 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SLC6A7Q99884 636 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 MYOTQ9UBF9 498 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 FBXL2Q9UKC9 423 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 FBXO4Q9UKT5 387 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 LHFPL6Q9Y693 200 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 U3KQA8 63 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 TUBAL3A6NHL2 446 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SYT7O43581 403 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RP2O75695 350 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 PMS2P2O95744 297 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CSN2P05814 226 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 PGA4P0DJD7 388 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 PGA3P0DJD8 388 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 NAGAP17050 411 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RAB6AP20340 208 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ANOS1P23352 680 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 LAP3P28838 519 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CLDN6P56747 220 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CCL7P80098 99 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SORDQ00796 357 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 MFAP5Q13361 173 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF260Q3ZCT1 412 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SCGB2B2Q4G0G5 96 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SLC22A6Q4U2R8 563 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ALKAL2Q6UX46 152 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RNF144BQ7Z419 303 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RTN4RL2Q86UN3 420 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 CCDC120Q96HB5 630 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SLC25A21Q9BQT8 299 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-204ENST00000501271 C1QTNF6Q9BXI9 259 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 ARL6Q9H0F7 186 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 SLCO5A1Q9H2Y9 848 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 METTL7AQ9H8H3 244 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 FSCN3Q9NQT6 498 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 UPB1Q9UBR1 384 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 KIF25Q9UIL4 384 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 RARRES3Q9UL19 164 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 B3GALT1Q9Y5Z6 326 aa8.76□□□□□ -1.01
CLIP1-204ENST00000501271 IGLV3-32A0A0A0MS00 114 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 IGHV5-10-1A0A0J9YXX1 117 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 SMAD9O15198 467 aaKnown RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 TRAF3IP2O43734 574 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 KLK2P20151 261 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 HSD11B1P28845 292 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CDAP32320 146 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 QRFPP83859 136 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 NKPD1Q17RQ9 610 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 C3orf33Q6P1S2 294 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 KLHL24Q6TFL4 600 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 GPAT4Q86UL3 456 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 FJX1Q86VR8 437 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF584Q8IVC4 421 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 UEVLDQ8IX04 471 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 C12orf45Q8N5I9 185 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 GVQW1Q8N7I0 195 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 NOXO1Q8NFA2 376 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 OR1M1Q8NGA1 313 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 OR5L2Q8NGL0 311 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 OR13C9Q8NGT0 318 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CCDC107Q8WV48 283 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 FOXRED1Q96CU9 486 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CXorf58Q96LI9 332 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 SOX7Q9BT81 388 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CRB3Q9BUF7 120 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 EDEM2Q9BV94 578 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 AKIRIN1Q9H9L7 192 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 KCNN3Q9UGI6 736 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 ZNF230Q9UIE0 474 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 RAB22AQ9UL26 194 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 TRAV14DV4A0A0A6YYC5 116 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 RAMP1O60894 148 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 ZFAND5O76080 213 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 DCNP07585 359 aaKnown RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 VSIG8P0DPA2 414 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 LIPCP11150 499 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 PPP3CBP16298 524 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 MSX1P28360 303 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 EPHA8P29322 1005 aaPredicted RBP8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CLRN1P58418 232 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 GPR85P60893 370 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 DHRS2Q13268 280 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 THEM4Q5T1C6 240 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CARD17Q5XLA6 110 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 TMEM65Q6PI78 240 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 TRAPPC6BQ86SZ2 158 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CD163Q86VB7 1156 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 OR2M3Q8NG83 312 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 OR51E1Q8TCB6 317 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 NUDCD2Q8WVJ2 157 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 MRGPRFQ96AM1 343 aa8.75□□□□□ -1.01
CLIP1-204ENST00000501271 CCDC74BQ96LY2 380 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms