RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 REG4Q9BYZ8 158 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RNF32Q9H0A6 362 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 OR51E2Q9H255 320 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SLCO5A1Q9H2Y9 848 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 OR52D1Q9H346 318 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 GALNT9Q9HCQ5 603 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 P4HTMQ9NXG6 502 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SUSD2Q9UGT4 822 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF223Q9UK11 482 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 FBXL2Q9UKC9 423 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 GRIP1Q9Y3R0 1128 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ATP23Q9Y6H3 246 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 C5orf52A6NGY3 159 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SERINC4A6NH21 518 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 NPIPB9F8W1W9 429 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 DSCR3O14972 297 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 MAGEB4O15481 346 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 NUDT14O95848 222 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 F10P00742 488 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 APOC3P02656 99 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 C1QBP02746 253 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 GZMHP20718 246 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ITPKBP27987 946 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ABCD3P28288 659 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 TGM4P49221 684 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 COMPP49747 757 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 SMIM11AP58511 58 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RAB2AP61019 212 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RPS18P62269 152 aaKnown RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 GPR50Q13585 617 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 INSL4Q14641 139 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 HLXQ14774 488 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 FBXW9Q5XUX1 488 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 C12orf73Q69YU5 71 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 ZNF517Q6ZMY9 492 aaPredicted RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CLDN22Q8N7P3 220 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 YIPF7Q8N8F6 280 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 APCDD1LQ8NCL9 501 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 OR4D9Q8NGE8 314 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 OR4D6Q8NGJ1 314 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PIGXQ8TBF5 258 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CCDC107Q8WV48 283 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 KATNB1Q9BVA0 655 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 UBQLN3Q9H347 655 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PRDM13Q9H4Q3 707 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 CHRNA9Q9UGM1 479 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RARRES3Q9UL19 164 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 YARS2Q9Y2Z4 477 aaKnown RBP5.53□□□□□ -1.52
SSBP1-213ENST00000496622 PCNX3Q9H6A9 2034 aa5.53□□□□□ -1.52
SSBP1-213ENST00000496622 RTTNQ86VV8 2226 aa5.52□□□□□ -1.52
SSBP1-213ENST00000496622 AKAP13Q12802 2813 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CEP295Q9C0D2 2601 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 A0A0B4J2E0 115 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 A0A1B0GX12 115 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ARRDC5A6NEK1 342 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PCNX2A6NKB5 2137 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FAM171A2A8MVW0 826 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 D6RAR5 112 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PRR23D1E9PI22 279 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 LGALS8O00214 317 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TCF21O43680 179 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CDC40O60508 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 UTS2O95399 124 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SNRPCP09234 159 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PRR23D2P0DMB1 279 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TBXA2RP21731 343 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 GADD45AP24522 165 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CTSSP25774 331 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CEACAM6P40199 344 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 NAA10P41227 235 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 HCCSP53701 268 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FBXW4P57775 412 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 GABARAPL2P60520 117 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ELAVL1Q15717 326 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF620Q6ZNG0 422 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SLC16A14Q7RTX9 510 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZBTB34Q8NCN2 500 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 HOXB13Q92826 284 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CORO2AQ92828 525 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 LCORQ96JN0 433 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ZNF582Q96NG8 517 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 OR14A2Q96R54 314 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 ELOVL1Q9BW60 279 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 GPR87Q9BY21 358 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM27Q9HBJ8 222 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TMEM138Q9NPI0 162 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 HINT3Q9NQE9 182 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 CLN6Q9NWW5 311 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 SEMA5BQ9P283 1151 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 B3GALT1Q9Y5Z6 326 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TRAV34A0A0B4J273 112 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 BLOC1S5-TXNDC5H3BN57 136 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PPBPP02775 128 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 MRPL3P09001 348 aaKnown RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PVALBP20472 110 aaPredicted RBP5.52□□□□□ -1.53
SSBP1-213ENST00000496622 GLRA1P23415 457 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 TNFSF4P23510 183 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 PPICP45877 212 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 FHITP49789 147 aa5.52□□□□□ -1.53
SSBP1-213ENST00000496622 DCDP81605 110 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms