RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 STRAPQ9Y3F4 350 aaKnown RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 V9GYS6 101 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 SEC11BP0C7V7 166 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 EPHA1P21709 976 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 PSMB10P40306 273 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 TDGF1P3P51864 188 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 RAB11BQ15907 218 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 AARDQ4LEZ3 155 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 LY6G5CQ5SRR4 150 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR2T2Q6IF00 324 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR51D1Q8NGF3 324 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 OR9A1PQ8NGU1 263 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZMYND19Q96E35 227 aaPredicted RBP8.16□□□□□ -1.1
HPS4-217ENST00000496385 ADGRG7Q96K78 797 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 DPEP2Q9H4A9 486 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 PELI2Q9HAT8 420 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 LUZP4Q9P127 313 aa8.16□□□□□ -1.1
HPS4-217ENST00000496385 ZDBF2Q9HCK1 2354 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 C1QTNF3-AMACRE9PGA6 284 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 M0QYG6 137 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 NUDT21O43809 227 aaKnown RBP8.15□□□□□ -1.1
HPS4-217ENST00000496385 DFFBO76075 338 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 GZMBP10144 247 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 NCBP2P52298 156 aaKnown RBP eCLIP8.15□□□□□ -1.1
HPS4-217ENST00000496385 PLA2G7Q13093 441 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 ELOBQ15370 118 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 C2orf76Q3KRA6 126 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 TMEM31Q5JXX7 168 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 OLIG3Q7RTU3 272 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 FAM220AQ7Z4H9 259 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 PPP1R3BQ86XI6 285 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 ARL14Q8N4G2 192 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 OR4K15Q8NH41 348 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 PTX4Q96A99 478 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 FAM3DQ96BQ1 224 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 HIST1H2BLQ99880 126 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 EIF5A2Q9GZV4 153 aaKnown RBP8.15□□□□□ -1.1
HPS4-217ENST00000496385 SLC25A31Q9H0C2 315 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 PDE7BQ9NP56 450 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.1
HPS4-217ENST00000496385 LSM7Q9UK45 103 aaKnown RBP8.15□□□□□ -1.1
HPS4-217ENST00000496385 A0A087WZY1 265 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 C13orf42A0A1B0GVH6 325 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 LNP1A1A4G5 178 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 TMEM210A6NLX4 147 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 EREGO14944 169 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 SNRPCP09234 159 aaKnown RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 CD37P11049 281 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 SRFP11831 508 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 RAB6AP20340 208 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 AKT2P31751 481 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 GNG10P50151 68 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ZNF136P52737 540 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 NANOS3P60323 173 aaKnown RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 MRPS11P82912 194 aaKnown RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 AGERQ15109 404 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ZNHIT3Q15649 155 aaPredicted RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 RPL7L1Q6DKI1 246 aaKnown RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 FAM166AQ6J272 317 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 KCTD9Q7L273 389 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 C5orf24Q7Z6I8 188 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ZNF584Q8IVC4 421 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 CYB561A3Q8NBI2 242 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 SVIPQ8NHG7 77 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 CD300LFQ8TDQ1 290 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ALG14Q96F25 216 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 C20orf24Q9BUV8 137 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 ARV1Q9H2C2 271 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 CLEC4EQ9ULY5 219 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 FARSAQ9Y285 508 aaKnown RBP8.15□□□□□ -1.11
HPS4-217ENST00000496385 MEMO1Q9Y316 297 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 SLCO1B1Q9Y6L6 691 aa8.15□□□□□ -1.11
HPS4-217ENST00000496385 TECTAO75443 2155 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MEIS3P1A6NDR6 274 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MSGN1A6NI15 193 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 ZNF354AO60765 605 aaPredicted RBP8.14□□□□□ -1.11
HPS4-217ENST00000496385 ALOX12BO75342 701 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 DANCRP0C864 163 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 LMO1P25800 156 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 PRLHRP49683 370 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 EFNB2P52799 333 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 PRKAG1P54619 331 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 RUNX3Q13761 415 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MDGA2Q7Z553 956 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 HMGN2P46Q86SG4 172 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 OR13C2Q8NGS9 318 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 METTL21AQ8WXB1 218 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 IRF7Q92985 503 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 MCHR2Q969V1 340 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 RNF166Q96A37 237 aaPredicted RBP8.14□□□□□ -1.11
HPS4-217ENST00000496385 C2orf50Q96LR7 162 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 FOXQ1Q9C009 403 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 COMMD4Q9H0A8 199 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 CRLF2Q9HC73 371 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 PRDM7Q9NQW5 492 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 OR52A1Q9UKL2 312 aa8.14□□□□□ -1.11
HPS4-217ENST00000496385 NTNG1Q9Y2I2 539 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms