RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TAS2R39P59534 338 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF45Q02386 682 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 UNC119Q13432 240 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 GPNMBQ14956 572 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF726P1Q15940 193 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 Q1RN00 199 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 GSG1Q2KHT4 349 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 CASC10Q5T4H9 136 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 TPTE2P1Q5T6R2 138 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 DUX4L9Q6RFH8 374 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 WDR82Q6UXN9 313 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF621Q6ZSS3 439 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 HSD17B13Q7Z5P4 300 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 KIF2BQ8N4N8 673 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 OR6N2Q8NGY6 317 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 OR51F2Q8NH61 342 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 SUN5Q8TC36 379 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ACER1Q8TDN7 264 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 SDR42E1Q8WUS8 393 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF689Q96CS4 500 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 RNF170Q96K19 258 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 FCRL1Q96LA6 429 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 P2RX4Q99571 388 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 GPR21Q99679 349 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 NAPGQ99747 312 aaPredicted RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 FOXC2Q99958 501 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 LZTS2Q9BRK4 669 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 POLR2J2Q9GZM3 115 aaKnown RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 POLR2J3Q9H1A7 115 aaKnown RBP3.33□□□□□ -1.88
GTF3A-208ENST00000493903 DEFB127Q9H1M4 99 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 PTGES2Q9H7Z7 377 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 VCX3AQ9NNX9 186 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 STMN3Q9NZ72 180 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 CLCF1Q9UBD9 225 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 DUX4Q9UBX2 424 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF229Q9UJW7 825 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 VSIG4Q9Y279 399 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 RAB3GAP2Q9H2M9 1393 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 PXDNLA1KZ92 1463 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 MEGF6O75095 1541 aa3.33□□□□□ -1.88
GTF3A-208ENST00000493903 A0A087WWV3 80 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KIR2DL5BA0A0G2JN68 375 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KIR2DL5BA0A0G2JPC4 375 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 H0YHG0 523 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 NUPL2O15504 423 aaKnown RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 LINC01565O15544 149 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 PHF1O43189 567 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ERI3O43414 337 aaKnown RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 DPM1O60762 260 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF354AO60765 605 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ENTPD5O75356 428 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 PLEKHA8P1O95397 391 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TDP2O95551 362 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 C6orf47O95873 294 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 IGKV3-20P01619 116 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 CALM1P0DP23 149 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 CALM2P0DP24 149 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 CALM3P0DP25 149 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 PRPS2P11908 318 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 HPGDP15428 266 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 RAB4AP20338 218 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 COX7A1P24310 79 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 HTR2CP28335 458 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 DEKP35659 375 aaKnown RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 MEOX2P50222 304 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 SEMG2Q02383 582 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TRDNQ13061 729 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ORC2Q13416 577 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ARFRP1Q13795 201 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 HIGD2BQ4VC39 106 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 UTF1Q5T230 341 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 RWDD4Q6NW29 188 aaKnown RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TMEM179Q6ZVK1 233 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 MBOAT2Q6ZWT7 520 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KIR2DL5AQ8N109 375 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 C17orf78Q8N4C9 275 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 SNX31Q8N9S9 440 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 NOXO1Q8NFA2 376 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 OR10H4Q8NGA5 316 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 OR6K6Q8NGW6 343 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KIR2DL5BQ8NHK3 375 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 LGALS14Q8TCE9 139 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TFGQ92734 400 aaPredicted RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 MRGPRFQ96AM1 343 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 ZNF599Q96NL3 588 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 VGLL1Q99990 258 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 NICN1Q9BSH3 213 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 NAA50Q9GZZ1 169 aaKnown RBP3.32□□□□□ -1.88
GTF3A-208ENST00000493903 SYT4Q9H2B2 425 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 GOLPH3Q9H4A6 298 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 C15orf41Q9Y2V0 281 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 SLC25A15Q9Y619 301 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KCNE3Q9Y6H6 103 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TTC21AQ8NDW8 1320 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 C4BP0C0L5 1744 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 TAF1LQ8IZX4 1826 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 KIF13BQ9NQT8 1826 aa3.32□□□□□ -1.88
GTF3A-208ENST00000493903 UBR3Q6ZT12 1888 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms