RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 PISDQ9UG56 409 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 STARD10Q9Y365 291 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 RAB27BO00194 218 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 HLA-DQA2P01906 255 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 GNB3P16520 340 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 RPS23P62266 143 aaKnown RBP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF260Q3ZCT1 412 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CLEC18BQ6UXF7 455 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF550Q7Z398 422 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 MDGA2Q7Z553 956 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 MFSD9Q8NBP5 474 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM52Q8NDY8 209 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 OR1J1Q8NGS3 322 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 AQP3Q92482 292 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 COX14Q96I36 57 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CYYR1Q96J86 154 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 UCK1Q9HA47 277 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 CKLFQ9UBR5 152 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 B9D1Q9UPM9 204 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 FBXO7Q9Y3I1 522 aa10.49□□□□□ -0.73
HDAC4-210ENST00000493582 PUS1Q9Y606 427 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC4-210ENST00000493582 NUP210LQ5VU65 1888 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 A0A087WUJ7 227 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF727A8MUV8 499 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 SNCAP37840 140 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 PRPS1P60891 318 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 LSM6P62312 80 aaKnown RBP10.48□□□□□ -0.73
HDAC4-210ENST00000493582 CDK3Q00526 305 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 CCINQ13939 588 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 TOMM20Q15388 145 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ANKRD55Q3KP44 614 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ITPRIPL2Q3MIP1 535 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ALG10Q5BKT4 473 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF765Q7L2R6 523 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 OR2I1PQ8NGU4 316 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 OR2L8Q8NGY9 312 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 SCRT1Q9BWW7 348 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 LMAN1LQ9HAT1 526 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF107Q9UII5 783 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-210ENST00000493582 POMT1Q9Y6A1 747 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 DOCK9Q9BZ29 2069 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 OBSL1O75147 1896 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF354AO60765 605 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-210ENST00000493582 LRG1P02750 347 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 SFTPBP07988 381 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ELNP15502 786 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF84P51523 738 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 SLC25A1P53007 311 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 RPS4XP62701 263 aaKnown RBP10.48□□□□□ -0.73
HDAC4-210ENST00000493582 EGR3Q06889 387 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 MFGE8Q08431 387 aaPredicted RBP10.48□□□□□ -0.73
HDAC4-210ENST00000493582 GPR18Q14330 331 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 NNATQ16517 81 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM128Q5BJH2 165 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 C1QL4Q86Z23 238 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 TGIF2LXQ8IUE1 241 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 INTS14Q96SY0 518 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 C5orf66Q9H5L9 145 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 HCFC2Q9Y5Z7 792 aa10.48□□□□□ -0.73
HDAC4-210ENST00000493582 LDLRAD4O15165 306 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 LMX1BO60663 402 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 HKR1P10072 659 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 SELPP16109 830 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 TLX1P31314 330 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-210ENST00000493582 GRK6P43250 576 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 SPCS3P61009 180 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 RAP1AP62834 184 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 CHAF1BQ13112 559 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 C14orf28Q4W4Y0 310 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM268Q5VZI3 342 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ZNF529Q6P280 563 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 PRSS41Q7RTY9 318 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 OR9K2Q8NGE7 335 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 TMEM230Q96A57 120 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 TCTN2Q96GX1 697 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 ASB16Q96NS5 453 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 STACQ99469 402 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 GRHPRQ9UBQ7 328 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
HDAC4-210ENST00000493582 DAPP1Q9UN19 280 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 TRPM6Q9BX84 2022 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 C1QL1O75973 258 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 F10P00742 488 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 CST4P01036 141 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 SOD3P08294 240 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 LYL1P12980 280 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 EIF5AP63241 154 aaKnown RBP10.47□□□□□ -0.73
HDAC4-210ENST00000493582 SPEM2Q0P670 501 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 KIF26BQ2KJY2 2108 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 MESTQ5EB52 335 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 HIST2H3AQ71DI3 136 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 RNASE11Q8TAA1 199 aaKnown RBP10.47□□□□□ -0.73
HDAC4-210ENST00000493582 GAL3ST3Q96A11 431 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 RAB7BQ96AH8 199 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 COLEC10Q9Y6Z7 277 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 URGCP-MRPS24S4R325 110 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 HOXA2O43364 376 aa10.47□□□□□ -0.73
HDAC4-210ENST00000493582 PRNPP04156 253 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms