RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 FAM53BQ14153 422 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 MRPL23Q16540 153 aaKnown RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 TEX30Q5JUR7 227 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 FAM222AQ5U5X8 452 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 CHST4Q8NCG5 386 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 C1orf64Q8NEQ6 169 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 OR52E2Q8NGJ4 325 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 NUBPLQ8TB37 319 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 KLF14Q8TD94 323 aaPredicted RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 ZCCHC13Q8WW36 166 aaKnown RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 EEF1AKMT3Q96AZ1 226 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 WDR34Q96EX3 536 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 IP6K3Q96PC2 410 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 LZTS2Q9BRK4 669 aa2.23□□□□□ -2.05
CCDC39-206ENST00000489868 ZSCAN16Q9H4T2 348 aaPredicted RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 UXTQ9UBK9 157 aaPredicted RBP2.23□□□□□ -2.05
CCDC39-206ENST00000489868 ATAD2BQ9ULI0 1458 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 IGKV2-24A0A0C4DH68 120 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 A0A1B0GW55 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 OR5H1A6NKK0 313 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 ARG1P05089 322 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4L2P0CJ85 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4L3P0CJ86 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4L5P0CJ88 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4L6P0CJ89 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4L7P0CJ90 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 STXBP1P61764 594 aaKnown RBP2.22□□□□□ -2.05
CCDC39-206ENST00000489868 SP4Q02446 784 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 BAMBIQ13145 260 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 NPSR1Q6W5P4 371 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 CMTM1Q8IZ96 169 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 IQCKQ8N0W5 287 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 ZNF645Q8N7E2 425 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 NECAB1Q8N987 351 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 APCDD1LQ8NCL9 501 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 GPR26Q8NDV2 337 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 ACMSDQ8TDX5 336 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 ZFP3Q96NJ6 502 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 CDX2Q99626 313 aaPredicted RBP2.22□□□□□ -2.05
CCDC39-206ENST00000489868 ANKRD60Q9BZ19 345 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 SAMSN1Q9NSI8 373 aaKnown RBP2.22□□□□□ -2.05
CCDC39-206ENST00000489868 DUX4Q9UBX2 424 aa2.22□□□□□ -2.05
CCDC39-206ENST00000489868 SMIM26A0A096LP01 95 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 LYRM9A8MSI8 78 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 H7C1H1 209 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 AIM2O14862 343 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 CLDN11O75508 207 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 CYB5R3P00387 301 aaPredicted RBP2.21□□□□□ -2.06
CCDC39-206ENST00000489868 RBM34P42696 430 aaKnown RBP2.21□□□□□ -2.06
CCDC39-206ENST00000489868 ACTR3P61158 418 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 SIGLEC14Q08ET2 396 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 TMEM136Q6ZRR5 245 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 CBLN2Q8IUK8 224 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 TMEM104Q8NE00 496 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 OR5T1Q8NG75 326 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF317Q96PQ6 595 aaPredicted RBP2.21□□□□□ -2.06
CCDC39-206ENST00000489868 RHOXF2Q9BQY4 288 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 SLC17A7Q9P2U7 560 aa2.21□□□□□ -2.06
CCDC39-206ENST00000489868 IGHV3-49A0A0A0MS15 119 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CLOCKO15516 846 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 FLOT1O75955 427 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 OR2J3O76001 311 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 AQP8O94778 261 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 LHBP01229 141 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 UQCRFS1P1P0C7P4 283 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CT45A6P0DMU7 189 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CT45A5P0DMU8 189 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CT45A7P0DMV0 189 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 BMI1P35226 326 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CRISP1P54107 249 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 RPS11P62280 158 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CYP24A1Q07973 514 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 SELENBP1Q13228 472 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 DGCR6Q14129 220 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF266Q14584 549 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CT45A1Q5HYN5 189 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
CCDC39-206ENST00000489868 FAM228AQ86W67 206 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 OR7G2Q8NG99 324 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 CT45A3Q8NHU0 189 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 APH1BQ8WW43 257 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 TVP23CQ96ET8 276 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 RNF145Q96MT1 663 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 SHANK2-AS3Q9BTD1 123 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 FRMD8P1Q9BZ68 369 aaPredicted RBP2.2□□□□□ -2.06
CCDC39-206ENST00000489868 TMEM27Q9HBJ8 222 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 COMMD3-BMI1R4GMX3 469 aa2.2□□□□□ -2.06
CCDC39-206ENST00000489868 IGHV1-69DA0A0B4J2H0 117 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 SCAMP2O15127 329 aaKnown RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 RAD51CO43502 376 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 EIF4E2O60573 245 aaKnown RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 ZNF24P17028 368 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 LGALS3P17931 250 aaKnown RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 POLR2IP36954 125 aaKnown RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 FLI1Q01543 452 aaPredicted RBP2.19□□□□□ -2.06
CCDC39-206ENST00000489868 NCF4Q15080 339 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 SSX2Q16385 188 aa2.19□□□□□ -2.06
CCDC39-206ENST00000489868 C1orf185Q5T7R7 199 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms