RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 BTG1P62324 171 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ROM1Q03395 351 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 PLA2G7Q13093 441 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 SLC17A1Q14916 467 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 TEX30Q5JUR7 227 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 RNFT1Q5M7Z0 435 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 LRRN1Q6UXK5 716 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ASB17Q8WXJ9 295 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ABHD6Q9BV23 337 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 RCE1Q9Y256 329 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF281Q9Y2X9 895 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 IGHV3-15A0A0B4J1V0 119 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 CIB4A0PJX0 185 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 OR4C45A6NMZ5 311 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 HSPB2A8KAH6 182 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 LEUTXA8MZ59 168 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 SSNA1O43805 119 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 WISP2O76076 250 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 IGHG1P01857 330 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF43P17038 809 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 GDNFP39905 211 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 PMP22Q01453 160 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 EIF2B1Q14232 305 aaKnown RBP10.77□□□□□ -0.69
HDAC6-230ENST00000488543 HSPB2Q16082 182 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 HIST3H3Q16695 136 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF766Q5HY98 468 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 FDX2Q6P4F2 183 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 SLC25A47Q6Q0C1 308 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 CREB3L2Q70SY1 520 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ELMOD2Q8IZ81 293 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 PRSS35Q8N3Z0 413 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF454Q8N9F8 522 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 OR2G2Q8NGZ5 317 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 NSMAFQ92636 917 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 HYLS1Q96M11 299 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 OR10A4Q9H209 315 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 ELOVL3Q9HB03 270 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 KLHL9Q9P2J3 617 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 KLK11Q9UBX7 282 aa10.77□□□□□ -0.69
HDAC6-230ENST00000488543 BOKQ9UMX3 212 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-230ENST00000488543 PTPRQQ9UMZ3 2332 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 C7orf66A4D0T2 115 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ICMTO60725 284 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 EIF1BO60739 113 aaKnown RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 NOS1APO75052 506 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 GATBO75879 557 aaKnown RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 HRGP04196 525 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 H2AFB2P0C5Z0 115 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CD46P15529 392 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ID4P47928 161 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SOX2P48431 317 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 PER3P56645 1201 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CLRN1P58418 232 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CSNK2A1P68400 391 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 GSG1Q2KHT4 349 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 THEM4Q5T1C6 240 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 C16orf54Q6UWD8 224 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 Q6ZTK2 550 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 TPRA1Q86W33 373 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 FAM109AQ8N4B1 249 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 TMEM251Q8N6I4 163 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 HAVCR2Q8TDQ0 301 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 C11orf40Q8WZ69 217 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 KCTD12Q96CX2 325 aaKnown RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ADGRG7Q96K78 797 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 RBP7Q96R05 134 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF703Q9H7S9 590 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 PHF3Q92576 2039 aaKnown RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 TRAV1-2A0A0B4J238 106 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 GJE1A6NN92 205 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SMAD9O15198 467 aaKnown RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CEACAM4O75871 244 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 PDGFAP04085 211 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ITGB2P05107 769 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 TMIGD3P0DMS9 266 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 VEGFCP49767 419 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 GFRA1P56159 465 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CLDN15P56746 228 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CLDN17P56750 224 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 PLGLB1Q02325 96 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 CARD17Q5XLA6 110 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 FCRLAQ7L513 359 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 GLB1L2Q8IW92 636 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ZNF679Q8IYX0 411 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 OR52N5Q8NH56 324 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 OR52I2Q8NH67 350 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 ST7LQ8TDW4 575 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 RNF128Q8TEB7 428 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SLC25A38Q96DW6 304 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 C4orf45Q96LM5 186 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SFXN2Q96NB2 322 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 NAA11Q9BSU3 229 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-230ENST00000488543 RAXQ9Y2V3 346 aa10.76□□□□□ -0.69
HDAC6-230ENST00000488543 TRBV5-5A0A0J9YX44 114 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 KLRC4-KLRK1H3BQV0 150 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 GPR171O14626 319 aa10.75□□□□□ -0.69
HDAC6-230ENST00000488543 AQP8O94778 261 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms