RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 OR6K2Q8NGY2 324 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OR5W2Q8NH69 310 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OR5AK2Q8NH90 309 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 HMGB4Q8WW32 186 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 MRGPRFQ96AM1 343 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 KATNBL1Q9H079 304 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 P4HTMQ9NXG6 502 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ZNF581Q9P0T4 197 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 IL36AQ9UHA7 158 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OARD1Q9Y530 152 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 SIRT4Q9Y6E7 314 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 TGIF2-C20orf24A0A0A6YYL0 155 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 F6UZH7 168 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 B3GALT4O96024 378 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 PDYNP01213 254 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ITGB2P05107 769 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 LIPFP07098 398 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ATF1P18846 271 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 PPIBP23284 216 aaKnown RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 MAPK14Q16539 360 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 CHRDL2Q6WN34 429 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ZNF836Q6ZNA1 936 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 TTLL10Q6ZVT0 673 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 SFXN5Q8TD22 340 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ORAI3Q9BRQ5 295 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 SLITRK2Q9H156 845 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ARV1Q9H2C2 271 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 MRPL27Q9P0M9 148 aaKnown RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 KLK11Q9UBX7 282 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 SLC23A2Q9UGH3 650 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 NINQ8N4C6 2090 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 F5P12259 2224 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ARID1BQ8NFD5 2236 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 GREB1Q4ZG55 1949 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ICE1Q9Y2F5 2266 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 F5H0A9 414 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 H3BN98 237 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 CDIPTO14735 213 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 PCDH7O60245 1069 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OPN1SWP03999 348 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OR8U9P0C7N5 309 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 AFF3P51826 1226 aaKnown RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 RND2P52198 227 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 TDRG1Q3Y452 100 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 CPTPQ5TA50 214 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 FRG2Q64ET8 278 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 SP5Q6BEB4 398 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 PTCRAQ6ISU1 281 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 NOXRED1Q6NXP6 359 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ZNF343Q6P1L6 599 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ESPNLQ6ZVH7 1005 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ZNF280BQ86YH2 543 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 COMMD1Q8N668 190 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 OR1P1Q8NH06 330 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ANKRD9Q96BM1 317 aaPredicted RBP5.72□□□□□ -1.49
SIK3-212ENST00000488337 TIFAQ96CG3 184 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 FRG2BQ96QU4 278 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 MICU1Q9BPX6 476 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 ATG10Q9H0Y0 220 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 RAB22AQ9UL26 194 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 CORO2BQ9UQ03 480 aa5.72□□□□□ -1.49
SIK3-212ENST00000488337 IRGMA1A4Y4 181 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 PRAMEF27A3QJZ7 478 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 TVP23AA6NH52 213 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 UPK3BL1B0FP48 263 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 UPK3BL2E5RIL1 263 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 PRAMEF4O60810 478 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 RAMP1O60894 148 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 B4GALT2O60909 372 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 CST4P01036 141 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 HOXD9P28356 352 aaPredicted RBP5.71□□□□□ -1.49
SIK3-212ENST00000488337 COMPP49747 757 aaPredicted RBP5.71□□□□□ -1.49
SIK3-212ENST00000488337 RGNQ15493 299 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 RAB11BQ15907 218 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 FBLN7Q53RD9 439 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 BEX5Q5H9J7 111 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 PRAMEF9Q5VWM5 478 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 CD300LDQ6UXZ3 194 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 SYT9Q86SS6 491 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 ZFP3Q96NJ6 502 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 TRIB3Q96RU7 358 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 SMAD5Q99717 465 aaKnown RBP5.71□□□□□ -1.49
SIK3-212ENST00000488337 C20orf24Q9BUV8 137 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 BOCQ9BWV1 1114 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 RBKSQ9H477 322 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 CNTD2Q9H8S5 307 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 SLC35D1Q9NTN3 355 aa5.71□□□□□ -1.49
SIK3-212ENST00000488337 MRPL15Q9P015 296 aaKnown RBP5.71□□□□□ -1.49
SIK3-212ENST00000488337 ZNF223Q9UK11 482 aaPredicted RBP5.71□□□□□ -1.49
SIK3-212ENST00000488337 PPP5D1E7EU14 171 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 DCTN6O00399 190 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 DNAJB6O75190 326 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 CKMP06732 381 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 SLC35E2P0CK97 266 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 RAB6AP20340 208 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 FPR2P25090 351 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 DCTDP32321 178 aa5.71□□□□□ -1.5
SIK3-212ENST00000488337 IGFALSP35858 605 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms