RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CLDN22Q8N7P3 220 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 NPEPL1Q8NDH3 523 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 OR10A6Q8NH74 314 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 DUS3LQ96G46 650 aaKnown RBP8.66□□□□□ -1.02
SMURF1-204ENST00000480055 OR2V2Q96R30 315 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 CGREF1Q99674 301 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 PKP2Q99959 881 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 ALG12Q9BV10 488 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 PCDHAC1Q9H158 963 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 MMP27Q9H306 513 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 BEX1Q9HBH7 125 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 NDUFA13Q9P0J0 144 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 IL19Q9UHD0 177 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 RIMS3Q9UJD0 308 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 MED31Q9Y3C7 131 aa8.66□□□□□ -1.02
SMURF1-204ENST00000480055 TRAV40A0A0B4J280 105 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 MDFIC2A0A1B0GVS7 189 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 CEACAM18A8MTB9 384 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 A8MXK9 166 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 DOK2O60496 412 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 CYB5R3P00387 301 aaPredicted RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 TNFRSF1BP20333 461 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 MSR1P21757 451 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 TUBG1P23258 451 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 HTR5AP47898 357 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 CTXN1P60606 82 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 RPL27P61353 136 aaKnown RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 SRSF4Q08170 494 aaKnown RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 PIN1Q13526 163 aaPredicted RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 BRD3OSQ6XYD6 125 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 C9orf139Q6ZV77 190 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 IGFN1Q86VF2 1251 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 PQLC1Q8N2U9 271 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 POU5F2Q8N7G0 328 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 OR10S1Q8NGN2 331 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 OR4F5Q8NH21 305 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 FNDC8Q8TC99 324 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 RAB40AQ8WXH6 277 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 GATAD2BQ8WXI9 593 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 PLEKHA8Q96JA3 519 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 YIPF3Q9GZM5 350 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 WNT10AQ9GZT5 417 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 POFUT1Q9H488 388 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 KAT8Q9H7Z6 458 aaKnown RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 EMC7Q9NPA0 242 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 TUBG2Q9NRH3 451 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 PDP1Q9P0J1 537 aaPredicted RBP8.65□□□□□ -1.02
SMURF1-204ENST00000480055 MIOXQ9UGB7 285 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 BAG5Q9UL15 447 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 RAB26Q9ULW5 256 aa8.65□□□□□ -1.02
SMURF1-204ENST00000480055 IGHV2-70DA0A0C4DH43 119 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 IGHV3-64DA0A0J9YX35 117 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 A0A1B0GUS0 222 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 SMIM31A0A1B0GVY4 71 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 F5H0A9 414 aaPredicted RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 H7C1C5 153 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 M0QZ24 198 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 PLXNB1O43157 2135 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 PIP5K1CO60331 668 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 OR5F1O95221 314 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 WNT2P09544 360 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 IFI30P13284 250 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 KITLGP21583 273 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 IFNA8P32881 189 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 ADMP35318 185 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 OR1E2P47887 323 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 HSPA13P48723 471 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 RAG2P55895 527 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 LCN6P62502 163 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 SCRN3Q0VDG4 424 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 MED21Q13503 144 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 CYLC2Q14093 348 aaPredicted RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 MAPRE2Q15555 327 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 VMACQ2NL98 169 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 ZNF362Q5T0B9 420 aaPredicted RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 FAM205BPQ63HN1 556 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 SLC27A4Q6P1M0 643 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 FIP1L1Q6UN15 594 aaKnown RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 HACD2Q6Y1H2 254 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 Q6ZR03 302 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 NLRC3Q7RTR2 1065 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 KLBQ86Z14 1044 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 ZDHHC13Q8IUH4 622 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 MICU2Q8IYU8 434 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 ZNF420Q8TAQ5 688 aaPredicted RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 PYDC1Q8WXC3 89 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 PTP4A1Q93096 173 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 UBE2FQ969M7 185 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 NMD3Q96D46 503 aaKnown RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 BPIFA2Q96DR5 249 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 RHOVQ96L33 236 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 COG8Q96MW5 612 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 SIGLEC11Q96RL6 698 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 CITED1Q99966 193 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 POLR2J2Q9GZM3 115 aaKnown RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 POLR2J3Q9H1A7 115 aaKnown RBP8.64□□□□□ -1.03
SMURF1-204ENST00000480055 GCM1Q9NP62 436 aa8.64□□□□□ -1.03
SMURF1-204ENST00000480055 PAPOLBQ9NRJ5 636 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms