RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PELI1Q96FA3 418 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZC3HAV1LQ96H79 300 aaKnown RBP10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 C4orf36Q96KX1 117 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPOCK3Q9BQ16 436 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 CLEC2DQ9UHP7 191 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 SNX5Q9Y5X3 404 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 TENM4Q6N022 2769 aa10.87□□□□□ -0.67
TRAPPC12-218ENST00000479897 A0A087WXM4 84 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 PRSS44E7EML9 344 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 M0R1B8 84 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CLDN1O95832 211 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 DBHP09172 617 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 PCMT1P22061 227 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CD40P25942 277 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 KIR2DL3P43628 341 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 TGM4P49221 684 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CX3CR1P49238 355 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 NR1H2P55055 460 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CDH15P55291 814 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 TAS2R43P59537 309 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 TAF13Q15543 124 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CCDC58Q4VC31 144 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 NCMAPQ5T1S8 102 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 OR2G6Q5TZ20 316 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 LIPNQ5VXI9 398 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPATC1Q76KD6 591 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 C1orf174Q8IYL3 243 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 YIPF7Q8N8F6 280 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 RPS4Y2Q8TD47 263 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPRYD4Q8WW59 207 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 SLC7A6Q92536 515 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 FCGR1BQ92637 280 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 RNF166Q96A37 237 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 C1QTNF5Q9BXJ0 243 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CCDC90BQ9GZT6 254 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 ESRP2Q9H6T0 727 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 SP140LQ9H930 580 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 ISG20L2Q9H9L3 353 aaKnown RBP10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CDH20Q9HBT6 801 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 ACOT13Q9NPJ3 140 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 TRIM36Q9NQ86 728 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 TBCCD1Q9NVR7 557 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 FAM206AQ9NX38 181 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 CRIM1Q9NZV1 1036 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 GNG8Q9UK08 70 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 R4GMQ9 66 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 PLCE1Q9P212 2302 aa10.86□□□□□ -0.67
TRAPPC12-218ENST00000479897 USP9YO00507 2555 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 C5orf49A4QMS7 147 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 MAGEA13PA6NCF6 341 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 DEFB108AA8MXU0 73 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 F5H5K5 113 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 J3QLW9 94 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 PSMD9O00233 223 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 MAGEB4O15481 346 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 CRYAAP02489 173 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 SMIM18P0DKX4 95 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF19P17023 458 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 LOXP28300 417 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 CALCRP30988 508 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 WNT5AP41221 380 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 CCR9P51686 369 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 PRKXP51817 358 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 EMX1Q04741 257 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 BSPH1Q075Z2 132 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 DAZAP2Q15038 168 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 UBE2UQ5VVX9 321 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ARL9Q6T311 187 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF367Q7RTV3 350 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 PAQR4Q8N4S7 273 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF283Q8N7M2 679 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 RORBQ92753 470 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 C4orf45Q96LM5 186 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 C1QTNF6Q9BXI9 259 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ISYNA1Q9NPH2 558 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 G6PC2Q9NQR9 355 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 KCNN3Q9UGI6 736 aa10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 NUFIP1Q9UHK0 495 aaKnown RBP10.85□□□□□ -0.67
TRAPPC12-218ENST00000479897 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 COL12A1Q99715 3063 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 TMEM269A0A1B0GVZ9 245 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 DPRXA6NFQ7 191 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 LOC110117498-PIK3R3F6TDL0 507 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 SIAH2O43255 324 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 SMPD2O60906 423 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 PNPP00491 289 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 TUBG1P23258 451 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 GBX2P52951 348 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF121P58317 390 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 NKX6-1P78426 367 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 GALK2Q01415 458 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 MFGE8Q08431 387 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 SNTB1Q13884 538 aaKnown RBP10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 DOC2BQ14184 412 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 SPHARQ15513 63 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 XAF1Q6GPH4 301 aa10.84□□□□□ -0.67
TRAPPC12-218ENST00000479897 ZNF544Q6NX49 715 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms