RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ADRA2CP18825 462 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 CRYGSP22914 178 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 MYL9P24844 172 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 THBS2P35442 1172 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 GRB2P62993 217 aaKnown RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 KRTAP27-1Q3LI81 207 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TPRA1Q86W33 373 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 OR8B12Q8NGG6 310 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TMEM106AQ96A25 262 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 OR2H1Q9GZK4 316 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 ZCCHC4Q9H5U6 513 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 NIPAL2Q9H841 368 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 NOX3Q9HBY0 568 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 NUFIP1Q9UHK0 495 aaKnown RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 AK6Q9Y3D8 172 aaKnown RBP12.64□□□□□ -0.39
COL4A6-206ENST00000477085 TIMM10BQ9Y5J6 103 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 N6AMT1Q9Y5N5 214 aa12.64□□□□□ -0.39
COL4A6-206ENST00000477085 MED12LQ86YW9 2145 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 LOC107986453A0A1B0GWG9 222 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 OR6C6A6NF89 314 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 F5H5K5 113 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 SGCEO43556 437 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 SLC2A2P11168 524 aaPredicted RBP12.63□□□□□ -0.39
COL4A6-206ENST00000477085 RAB35Q15286 201 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 SFRP5Q5T4F7 317 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 LRRTM1Q86UE6 522 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 CPEB3Q8NE35 698 aaKnown RBP12.63□□□□□ -0.39
COL4A6-206ENST00000477085 ZCCHC14Q8WYQ9 949 aaKnown RBP12.63□□□□□ -0.39
COL4A6-206ENST00000477085 SNRNP40Q96DI7 357 aaKnown RBP12.63□□□□□ -0.39
COL4A6-206ENST00000477085 SLC17A5Q9NRA2 495 aa12.63□□□□□ -0.39
COL4A6-206ENST00000477085 MBD3L4A6NDZ8 208 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-206ENST00000477085 MBD3L3A6NE82 208 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-206ENST00000477085 MBD3L5A6NJ08 208 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-206ENST00000477085 TNFSF13O75888 250 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 HLA-HP01893 362 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 ABOP16442 354 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 RAB3BP20337 219 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 MPGP29372 298 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 TNFSF8P32971 234 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF544Q6NX49 715 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 SFXN4Q6P4A7 337 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 STAC2Q6ZMT1 411 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 C3P1Q6ZMU1 363 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF704Q6ZNC4 412 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-206ENST00000477085 FAM57BQ71RH2 274 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 CD163Q86VB7 1156 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 LAX1Q8IWV1 398 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 ZNF283Q8N7M2 679 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 OR1F12Q8NHA8 337 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 MBD3L2Q8NHZ7 208 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-206ENST00000477085 OR51E1Q8TCB6 317 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
COL4A6-206ENST00000477085 CLDN25C9JDP6 229 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 RAF1P04049 648 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 TPOP07202 933 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 ACHEP22303 614 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 IGHV1-2P23083 117 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 SCRN3Q0VDG4 424 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 HIKESHIQ53FT3 197 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 IDNKQ5T6J7 187 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 CCDC190Q86UF4 302 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 CNEP1R1Q8N9A8 125 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 NAXEQ8NCW5 288 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 OR1K1Q8NGR3 316 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 FAM57AQ8TBR7 257 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 TSEN15Q8WW01 171 aaKnown RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 BCL2L2Q92843 193 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 LYZL4Q96KX0 146 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 SLX1AQ9BQ83 275 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 TUBD1Q9UJT1 453 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 HHLA2Q9UM44 414 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 PEX16Q9Y5Y5 336 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 A0A0B4J203 849 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 A6NIN4 97 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 FARS2O95363 451 aaKnown RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 CGAP01215 116 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 IGLV3-1P01715 115 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 ANXA2P07355 339 aaKnown RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 UBCP0CG48 685 aaKnown RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 EPXP11678 715 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 ATF1P18846 271 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 MAPK3P27361 379 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 PCBD1P61457 104 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 SNAI3Q3KNW1 292 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 PABPC1L2AQ5JQF8 200 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 TMEM244Q5VVB8 128 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 DNAAF1Q8NEP3 725 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 STARD4Q96DR4 205 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-206ENST00000477085 COMMD3Q9UBI1 195 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 DAPK2Q9UIK4 370 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
COL4A6-206ENST00000477085 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 NOTOA8MTQ0 251 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 M0R135 149 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 PAHP00439 452 aa12.6□□□□□ -0.39
COL4A6-206ENST00000477085 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms