RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 IL17RELQ6ZVW7 336 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 GLCCI1Q86VQ1 547 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 OR2Z1Q8NG97 314 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 OR9Q1Q8NGQ5 310 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 OR4Q3Q8NH05 313 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 ZNRF4Q8WWF5 429 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 ATF6BQ99941 703 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 NIPSNAP1Q9BPW8 284 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 RBM4Q9BWF3 364 aaKnown RBP9.48□□□□□ -0.89
CKS1B-206ENST00000474215 C1QTNF5Q9BXJ0 243 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 NMNAT2Q9BZQ4 307 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 PTTG3PQ9NZH4 202 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 WIPI2Q9Y4P8 454 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 ATRQ13535 2644 aa9.48□□□□□ -0.89
CKS1B-206ENST00000474215 ANK3Q12955 4377 aaKnown RBP9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ARRDC5A6NEK1 342 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 TVP23AA6NH52 213 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 RIIAD1A6NNX1 92 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 SURF4O15260 269 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 DNAJC8O75937 253 aaPredicted RBP9.47□□□□□ -0.89
CKS1B-206ENST00000474215 IFNGP01579 166 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 MSMBP08118 114 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ANPEPP15144 967 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 TNFRSF1AP19438 455 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 FMO3P31513 532 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ERFP50548 548 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 SLC25A1P53007 311 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 CRMP1Q14194 572 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 OR2T2Q6IF00 324 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ACSM5Q6NUN0 579 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 SLC27A4Q6P1M0 643 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 TMEM179BQ7Z7N9 219 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 PEG10Q86TG7 708 aaKnown RBP9.47□□□□□ -0.89
CKS1B-206ENST00000474215 NAA40Q86UY6 237 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 SPATA24Q86W54 205 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 OR8G5Q8NG78 346 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 OR51L1Q8NGJ5 315 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 TMEM186Q96B77 213 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 MAP6Q96JE9 813 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ZNF582Q96NG8 517 aaPredicted RBP9.47□□□□□ -0.89
CKS1B-206ENST00000474215 HCAR1Q9BXC0 346 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ZNF665Q9H7R5 613 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 WDR76Q9H967 626 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 LPAR2Q9HBW0 351 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 PNRC2Q9NPJ4 139 aaKnown RBP9.47□□□□□ -0.89
CKS1B-206ENST00000474215 ARMC1Q9NVT9 282 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 HIF1ANQ9NWT6 349 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 IL19Q9UHD0 177 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 POMPQ9Y244 141 aa9.47□□□□□ -0.89
CKS1B-206ENST00000474215 H3BN98 237 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF593O00488 134 aaPredicted RBP9.46□□□□□ -0.9
CKS1B-206ENST00000474215 GSC2O15499 205 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 LCATP04180 440 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 GYPBP06028 91 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 SPI1P17947 270 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 GRK5P34947 590 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 RPS27P42677 84 aaKnown RBP9.46□□□□□ -0.9
CKS1B-206ENST00000474215 BLVRAP53004 296 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 TPTEP56180 551 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 BNIP1Q12981 228 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 MALLQ13021 153 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 PCK2Q16822 640 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 LYPD4Q6UWN0 246 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 OR5AS1Q8N127 324 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 ATG16L2Q8NAA4 619 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF511Q8NB15 262 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 PAPD5Q8NDF8 572 aaKnown RBP9.46□□□□□ -0.9
CKS1B-206ENST00000474215 OR10S1Q8NGN2 331 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 OR13G1Q8NGZ3 307 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 OR51F2Q8NH61 342 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 TEX47Q8TBZ9 253 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 SPTSSAQ969W0 71 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 RAB39BQ96DA2 213 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 YY1AP1Q9H869 796 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 CMC2Q9NRP2 79 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 PDP1Q9P0J1 537 aaPredicted RBP9.46□□□□□ -0.9
CKS1B-206ENST00000474215 DNAJB9Q9UBS3 223 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 PPP1R3CQ9UQK1 317 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 MALRD1Q5VYJ5 2156 aa9.46□□□□□ -0.9
CKS1B-206ENST00000474215 COL6A5A8TX70 2615 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 TRAV20A0A0B4J274 112 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 TCRBV3S1A0A5B6 114 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 IQCF6A8MYZ5 107 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 PHF1O43189 567 aaPredicted RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 PLPP2O43688 288 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 FKBP6O75344 327 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 DEAF1O75398 565 aaPredicted RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 E2F6O75461 281 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 IGHV2-5P01817 119 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 SPARCP09486 303 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 SBK2P0C263 348 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 CLUP10909 449 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 SELEP16581 610 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 ZNF3P17036 446 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 PRKACGP22612 351 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 SRP14P37108 136 aaKnown RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 ENTPD1P49961 510 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 CBX1P83916 185 aa9.45□□□□□ -0.9
CKS1B-206ENST00000474215 GK2Q14410 553 aaPredicted RBP9.45□□□□□ -0.9
CKS1B-206ENST00000474215 TEX30Q5JUR7 227 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms