RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 SMYD3Q9H7B4 428 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 NUDT15Q9NV35 164 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MRPL22Q9NWU5 206 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 EHFQ9NZC4 300 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 MLXQ9UH92 298 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 RSPH14Q9UHP6 348 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PHF11Q9UIL8 331 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 PITPNC1Q9UKF7 332 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 NUP50Q9UKX7 468 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 SPATA2Q9UM82 520 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 TRAF3IP3Q9Y228 551 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 AK6Q9Y3D8 172 aaKnown RBP1.84□□□□□ -2.11
CALD1-216ENST00000473714 FAM215AQ9Y5M1 114 aa1.84□□□□□ -2.11
CALD1-216ENST00000473714 HUWE1Q7Z6Z7 4374 aaKnown RBP1.84□□□□□ -2.12
CALD1-216ENST00000473714 ALMS1Q8TCU4 4167 aa1.84□□□□□ -2.12
CALD1-216ENST00000473714 NINQ8N4C6 2090 aa1.84□□□□□ -2.12
CALD1-216ENST00000473714 HSPG2P98160 4391 aa1.84□□□□□ -2.12
CALD1-216ENST00000473714 DYNC1H1Q14204 4646 aaKnown RBP1.84□□□□□ -2.12
CALD1-216ENST00000473714 KMT2AQ03164 3969 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 TRAV9-2A0A087WT02 112 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ARPC4-TTLL3A0A0A6YYG9 625 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 A0A1B0GUS0 222 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 SERTM2A0A1B0GWG4 89 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 TCRBV9S1A1TA0A576 114 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 SLC5A10A0PJK1 596 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 DHRS7CA6NNS2 312 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 A8MX80 341 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 B4DXG7 233 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 TRDCB7Z8K6 153 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ANKRD63C9JTQ0 380 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 KLRC4-KLRK1H3BQV0 150 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 H7C423 109 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 K7EIL1 84 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 AIM2O14862 343 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PPP1R2P9O14990 202 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 NBR2O15453 112 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 EFNA2O43921 213 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PRKYO43930 277 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ZNF354AO60765 605 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 SNRNP200O75643 2136 aaKnown RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 GNA14O95837 355 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 HPP00738 406 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 RENP00797 406 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 IGLV3-27P01718 113 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PIGRP01833 764 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 FTH1P02794 183 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 P04436 131 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 CD55P08174 381 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 UMPSP11172 480 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ETS2P15036 469 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PGAM2P15259 253 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 VDAC1P21796 283 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 NTSP30990 170 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 GCKP35557 465 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 HSD17B2P37059 387 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 MAGEA1P43355 309 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 XCR1P46094 333 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 GSK3BP49841 420 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PRKXP51817 358 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 CCNHP51946 323 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 EFNA3P52797 238 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 KRTAP10-3P60369 221 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 YWHAGP61981 247 aaKnown RBP eCLIP1.83□□□□□ -2.12
CALD1-216ENST00000473714 RPL32P62910 135 aaKnown RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 UBA52P62987 128 aaKnown RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 OC90Q02509 493 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 CHRNB3Q05901 458 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 CD47Q08722 323 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 BST2Q10589 180 aaKnown RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 ASPHQ12797 758 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 CYLC2Q14093 348 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 ARL6IP1Q15041 203 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 LTB4RQ15722 352 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 PCK2Q16822 640 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 VPS26BQ4G0F5 336 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 BCL7AQ4VC05 210 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 XKR7Q5GH72 579 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 NHLRC3Q5JS37 347 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 LINC00242Q5T6M2 205 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ZNF658Q5TYW1 1059 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 ZNF57Q68EA5 555 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 LEMD1Q68G75 181 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 TTC19Q6DKK2 380 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 C22orf39Q6P5X5 142 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 STAC2Q6ZMT1 411 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 Q6ZN92 141 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 CLEC20AQ6ZU45 233 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 BZW1Q7L1Q6 419 aaKnown RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 ZNF571Q7Z3V5 609 aaPredicted RBP1.83□□□□□ -2.12
CALD1-216ENST00000473714 DHDDSQ86SQ9 333 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 SERPINA9Q86WD7 417 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 EGFL6Q8IUX8 553 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 NUDCD3Q8IVD9 361 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 LINC01561Q8N1V8 128 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ABHD12Q8N2K0 398 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ZDHHC22Q8N966 263 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 ACOT4Q8N9L9 421 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 MDS2Q8NDY4 140 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 OR11G2Q8NGC1 345 aa1.83□□□□□ -2.12
CALD1-216ENST00000473714 OR1L6Q8NGR2 347 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms