RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 ALOX12BO75342 701 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ENTPD5O75356 428 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 TRAPPC6AO75865 159 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 CST4P01036 141 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 PGA5P0DJD9 388 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ERGP11308 486 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ZNF30P17039 623 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 IGFBP3P17936 291 aaPredicted RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 HTR2CP28335 458 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 LCN1P31025 176 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 NCBP2P52298 156 aaKnown RBP eCLIP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ZNF138P52744 262 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ATP5J2P56134 94 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 SLC7A9P82251 487 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 HMGCS1Q01581 520 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 XRCC4Q13426 336 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 GPR176Q14439 515 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 PTPN20Q4JDL3 420 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 PDPK2PQ6A1A2 396 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 APOBEC3HQ6NTF7 200 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ZNF774Q6NX45 483 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 LINC00173Q6ZV60 143 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 FAM71AQ8IYT1 594 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 LINC01555Q8NAE3 123 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 OR6K2Q8NGY2 324 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 TMEM239Q8WW34 195 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 DCUN1D4Q92564 292 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 MARC2Q969Z3 335 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 NTAN1Q96AB6 310 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 DCPSQ96C86 337 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 CENPNQ96H22 339 aaPredicted RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 TSNAXQ99598 290 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 YTHDF1Q9BYJ9 559 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 CHMP4BQ9H444 224 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 GOLPH3Q9H4A6 298 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 REEP1Q9H902 201 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 ISYNA1Q9NPH2 558 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 FAM49BQ9NUQ9 324 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 SLC25A37Q9NYZ2 338 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 CD84Q9UIB8 345 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 HYOU1Q9Y4L1 999 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 V9GYY9 64 aa3.33□□□□□ -1.88
CCDC66-215ENST00000473322 USP42Q9H9J4 1324 aaKnown RBP3.33□□□□□ -1.88
CCDC66-215ENST00000473322 RAB19A4D1S5 217 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 RNASEK-C17orf49H0YIS7 233 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 CDC40O60508 579 aaKnown RBP eCLIP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 SMC2O95347 1197 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 MOSP00540 346 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 IGHV4-34P06331 123 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 RHOCP08134 193 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 GNAO1P09471 354 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 PNMA6AP0CW24 399 aaPredicted RBP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 PGA4P0DJD7 388 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 PGA3P0DJD8 388 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 ARR3P36575 388 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 CTRLP40313 264 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 PPICP45877 212 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 SMARCB1Q12824 385 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 DAZ2Q13117 558 aaKnown RBP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 CPTPQ5TA50 214 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 ERICH5Q6P6B1 374 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 NDUFAF7Q7L592 441 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 MRPL55Q7Z7F7 128 aaKnown RBP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 FAM71E2Q8N5Q1 922 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 C11orf72Q8NBR9 251 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 OR51E1Q8TCB6 317 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 SGTBQ96EQ0 304 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 CEP170P1Q96L14 293 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 IMMP1LQ96LU5 166 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 TRNT1Q96Q11 434 aaKnown RBP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 NRTNQ99748 197 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 HINT2Q9BX68 163 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 ANKHQ9HCJ1 492 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 MED4Q9NPJ6 270 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 DAZ3Q9NR90 486 aaKnown RBP3.32□□□□□ -1.88
CCDC66-215ENST00000473322 PCYOX1Q9UHG3 505 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 ZNF229Q9UJW7 825 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 ACOT9Q9Y305 439 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 OR51B2Q9Y5P1 312 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 KIF25-AS1Q9Y6Z4 181 aa3.32□□□□□ -1.88
CCDC66-215ENST00000473322 NFASCO94856 1347 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 PLAC8L1A1L4L8 177 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 ANKRD63C9JTQ0 380 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 H7C2Y5 167 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 EMC8O43402 210 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 SLC16A7O60669 478 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 GCGP01275 180 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 IGLV1-47P01700 117 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 RAB3AP20336 220 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 IL32P24001 234 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 MYL9P24844 172 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 HTR1DP28221 377 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 DEKP35659 375 aaKnown RBP3.31□□□□□ -1.88
CCDC66-215ENST00000473322 SERPINB8P50452 374 aa3.31□□□□□ -1.88
CCDC66-215ENST00000473322 SYNJ2BPP57105 145 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms