RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 TSPAN13O95857 204 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 IFNA5P01569 189 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RPS17P08708 135 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RNH1P13489 461 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 IDO1P14902 403 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 ABOP16442 354 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 HLA-GP17693 338 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CALCRP30988 508 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CD79BP40259 229 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 BDKRB1P46663 353 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CSNK1A1P48729 337 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 IDH2P48735 452 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RAG2P55895 527 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 VLDLRP98155 873 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 MGAT3Q09327 533 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 EIF2B1Q14232 305 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 SPA17Q15506 151 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 UBE2V2Q15819 145 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 ZBTB6Q15916 424 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 ATP6V1FQ16864 119 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RPEL1Q2QD12 228 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 TMEM249Q2WGJ8 235 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RFX4Q33E94 735 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 YIF1BQ5BJH7 314 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PDZD11Q5EBL8 140 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 OGFRL1Q5TC84 451 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PRR5LQ6MZQ0 368 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PNCKQ6P2M8 343 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 FAHD1Q6P587 224 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 BTNL3Q6UXE8 466 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 HACD2Q6Y1H2 254 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CCDC121Q6ZUS5 278 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 AHSA2Q719I0 299 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 HS3ST5Q8IZT8 346 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CCDC71LQ8N9Z2 235 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 LINC01555Q8NAE3 123 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 LFNGQ8NES3 379 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 AP3S1Q92572 193 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 RORBQ92753 470 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 ART4Q93070 314 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 IL22RA2Q969J5 263 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 MARC2Q969Z3 335 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CENPNQ96H22 339 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PACRGQ96M98 296 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 NOL4LQ96MY1 436 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 EBNA1BP2Q99848 306 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 SLC22A4Q9H015 551 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 ARMC7Q9H6L4 198 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PATZ1Q9HBE1 687 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 C6orf50Q9HD87 102 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 SPANXB1Q9NS25 103 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 FGFR1OP2Q9NVK5 253 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 SIGLEC8Q9NYZ4 499 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 UBQLN1Q9UMX0 589 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 COPS3Q9UNS2 423 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 SLC17A4Q9Y2C5 497 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 EXOSC1Q9Y3B2 195 aaKnown RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 OARD1Q9Y530 152 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CACNG2Q9Y698 323 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 PEG3Q9GZU2 1588 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 MN1Q10571 1320 aaPredicted RBP3.16□□□□□ -1.9
COL11A1-208ENST00000470170 UBN2Q6ZU65 1347 aa3.16□□□□□ -1.9
COL11A1-208ENST00000470170 CC2D2AQ9P2K1 1620 aa3.15□□□□□ -1.9
COL11A1-208ENST00000470170 RAB3GAP2Q9H2M9 1393 aa3.15□□□□□ -1.9
COL11A1-208ENST00000470170 GNG14A0A1W2PPG7 69 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 A0A1W2PQL4 384 aaPredicted RBP3.15□□□□□ -1.91
COL11A1-208ENST00000470170 PSMB11A5LHX3 300 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 HIDE1A8MVS5 230 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 H3BNH8 94 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 hCG_2039718K7EN88 272 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SOX15O60248 233 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 LYPLA2O95372 231 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 UTS2O95399 124 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 IGSF6O95976 241 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 IGHG4P01861 327 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SNRPAP09012 282 aaKnown RBP3.15□□□□□ -1.91
COL11A1-208ENST00000470170 PSMB5P28074 263 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SLCO1A2P46721 670 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 CAV2P51636 162 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 UGT2B15P54855 530 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 LINC00315P59091 139 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 OR2B8PP59922 312 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 UBE2MP61081 183 aaKnown RBP3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SLC35B1P78383 322 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 CCL7P80098 99 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 C2orf54Q08AI8 447 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SMARCB1Q12824 385 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 RAB40BQ12829 278 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 BNIP2Q12982 314 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SPCS2Q15005 226 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 GABRA6Q16445 453 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 SOHLH1Q5JUK2 328 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 ADNP2Q6IQ32 1131 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 C3orf33Q6P1S2 294 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 FAHD2BQ6P2I3 314 aaPredicted RBP3.15□□□□□ -1.91
COL11A1-208ENST00000470170 TSEN54Q7Z6J9 526 aaKnown RBP3.15□□□□□ -1.91
COL11A1-208ENST00000470170 CMC1Q7Z7K0 106 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 TMEM179BQ7Z7N9 219 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 NT5DC3Q86UY8 548 aa3.15□□□□□ -1.91
COL11A1-208ENST00000470170 BBS7Q8IWZ6 715 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms