RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 KCNK15Q9H427 330 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 RABL2AQ9UBK7 228 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 RABL2BQ9UNT1 228 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 FLVCR1Q9Y5Y0 555 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 TRAV6A0A075B6T7 132 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ARPC4-TTLL3A0A0A6YYG9 625 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF878C9JN71 531 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 TRAPPC2P0DI81 140 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 TRAPPC2BP0DI82 140 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ACHEP22303 614 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 GIFP27352 417 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 HLA-DMAP28067 261 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 SRSF6Q13247 344 aaKnown RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 SGCAQ16586 387 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 OR51A2Q8NGJ7 313 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 DMRTB1Q96MA1 342 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF416Q9BWM5 594 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 RANGRFQ9HD47 186 aaPredicted RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 PNRC2Q9NPJ4 139 aaKnown RBP16.13■□□□□ 0.17
COL9A3-205ENST00000466192 NUDT15Q9NV35 164 aa16.13■□□□□ 0.17
COL9A3-205ENST00000466192 FAM166BA8MTA8 275 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 MT-ND4P03905 459 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 UBCP0CG48 685 aaKnown RBP16.12■□□□□ 0.17
COL9A3-205ENST00000466192 ARSBP15848 533 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 POU3F4P49335 361 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 EFNB2P52799 333 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 KLF9Q13886 244 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-205ENST00000466192 TMEM244Q5VVB8 128 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 C20orf196Q8IYI0 205 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 MDS2Q8NDY4 140 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF845Q96IR2 970 aaPredicted RBP16.12■□□□□ 0.17
COL9A3-205ENST00000466192 DPAGT1Q9H3H5 408 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 DDX28Q9NUL7 540 aaKnown RBP16.12■□□□□ 0.17
COL9A3-205ENST00000466192 B4GALT7Q9UBV7 327 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 KLK11Q9UBX7 282 aa16.12■□□□□ 0.17
COL9A3-205ENST00000466192 GABARAPH6UMI1 98 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 DHHO43323 396 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 TTRP02766 147 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 ACSM4P0C7M7 580 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 IGFBP3P17936 291 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 NBL1P41271 181 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 MAGEA5P43359 124 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 CD83Q01151 205 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SNTB2Q13425 540 aaKnown RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 RAB11BQ15907 218 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 ABLIM2Q6H8Q1 611 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 FOXL2NBQ6ZUU3 175 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 RHOUQ7L0Q8 258 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 GALNTL5Q7Z4T8 443 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 NABP1Q96AH0 204 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 ZNF837Q96EG3 531 aaPredicted RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 FYTTD1Q96QD9 318 aaKnown RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 NELFAQ9H3P2 528 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 CDV3Q9UKY7 258 aaKnown RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 N6AMT1Q9Y5N5 214 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 OR5H15A6NDH6 313 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SLC17A2O00624 439 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SP1P08047 785 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 MSR1P21757 451 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SDHBP21912 280 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 CFPP27918 469 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 HSD11B1P28845 292 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 CCR6P51684 374 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SCAND1P57086 179 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 TAS2R20P59543 309 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 LSM6P62312 80 aaKnown RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 SPOCK1Q08629 439 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 C2orf76Q3KRA6 126 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 LUZP2Q86TE4 346 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 FCAMRQ8WWV6 532 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 PNPLA2Q96AD5 504 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 FAM3DQ96BQ1 224 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 RBM24Q9BX46 236 aaKnown RBP16.11■□□□□ 0.17
COL9A3-205ENST00000466192 PBOV1Q9GZY1 135 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 RCE1Q9Y256 329 aa16.11■□□□□ 0.17
COL9A3-205ENST00000466192 LINC01387J3KSC0 135 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 SULT1B1O43704 296 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 NME2P1O60361 137 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 TCRBP04435 133 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 FSTP19883 344 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 NME2P22392 152 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 TAF13Q15543 124 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 GLYATL3Q5SZD4 288 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 GLT8D1Q68CQ7 371 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 ELMOD2Q8IZ81 293 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 TMEM251Q8N6I4 163 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 INTS12Q96CB8 462 aaKnown RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 CACNG6Q9BXT2 260 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 ULBP2Q9BZM5 246 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 NKX2-8O15522 239 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 KRT33AO76009 404 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 LIPCP11150 499 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 GUCA1AP43080 201 aaPredicted RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 LHX2P50458 406 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 PRKXP51817 358 aa16.1■□□□□ 0.17
COL9A3-205ENST00000466192 PSMA6P60900 246 aaKnown RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 ENDOGQ14249 297 aaKnown RBP16.1■□□□□ 0.17
COL9A3-205ENST00000466192 ZFP69Q49AA0 526 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms