RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 ACTA1P68133 377 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PMP22Q01453 160 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 CNTN1Q12860 1018 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 NPRL3Q12980 569 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 BNIP2Q12982 314 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PEX6Q13608 980 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 CDH18Q13634 790 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PDK3Q15120 406 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TMED2Q15363 201 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TRIP13Q15645 432 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 KCTD19Q17RG1 926 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TRMT5Q32P41 509 aaKnown RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PARP15Q460N3 678 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ZBED5Q49AG3 693 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 C6orf52Q5T4I8 152 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 SLC27A4Q6P1M0 643 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 CENPUQ71F23 418 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 FCRLAQ7L513 359 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 OTOAQ7RTW8 1153 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ABHD12BQ7Z5M8 362 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TMEM135Q86UB9 458 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 DHFR2Q86XF0 187 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 STK40Q8N2I9 435 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 GPR137CQ8N3F9 429 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 METTL4Q8N3J2 472 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 SLC25A45Q8N413 288 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 SVOPLQ8N434 492 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 FAM89BQ8N5H3 189 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 SYT14Q8NB59 555 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 CCDC54Q8NEL0 328 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 OR5M1Q8NGP8 315 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 OR4K15Q8NH41 348 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 EXOSC8Q96B26 276 aaKnown RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PPP1R36Q96LQ0 422 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 FAM218AQ96MZ4 157 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ZNF599Q96NL3 588 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TMEM246Q9BRR3 403 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ALKBH7Q9BT30 221 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 YTHDF1Q9BYJ9 559 aaKnown RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 STRADBQ9C0K7 418 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ARMC7Q9H6L4 198 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 NIPAL2Q9H841 368 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 COQ10BQ9H8M1 238 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 FN3KRPQ9HA64 309 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PNPLA3Q9NST1 481 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 IMPAD1Q9NX62 359 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 TEX10Q9NXF1 929 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 ELF5Q9UKW6 265 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 PLEKHA6Q9Y2H5 1048 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 POLR3HQ9Y535 204 aaPredicted RBP4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 OR51B4Q9Y5P0 310 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 SNX10Q9Y5X0 201 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 HSPE1-MOB4S4R3N1 261 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 NOTCH3Q9UM47 2321 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 CR1P17927 2039 aa4.19□□□□□ -1.74
CACNA1C-223ENST00000465278 LOC285095A0A1B0GVY8 99 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 A0A1W2PRV1 198 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 A4D1N5 150 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 FAM159BA6NKW6 160 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 C15orf61A6NNL5 157 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 TMEM238C9JI98 176 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 NEDD8-MDP1E9PL57 170 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 H7C2Y5 167 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 UGT1A9O60656 530 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 PLIN3O60664 434 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 NME6O75414 186 aaPredicted RBP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 CLDN11O75508 207 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ZMPSTE24O75844 475 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ZFAND5O76080 213 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 SLC22A5O76082 557 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 NXPH2O95156 264 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 SHBGP04278 402 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 HOXC4P09017 264 aaPredicted RBP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ACSM4P0C7M7 580 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 OR8G3PP0DMU2 310 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 THRBP10828 461 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 PSKH1P11801 424 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 UGT1A6P19224 532 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 PTNP21246 168 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 HNRNPA2B1P22626 353 aaKnown RBP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 DCKP27707 260 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 OR3A2P47893 321 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 GABRA4P48169 554 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ARPP19P56211 112 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 CXCR4P61073 352 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 MAGOHP61326 146 aaKnown RBP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 NUTF2P61970 127 aaKnown RBP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 PSPHP78330 225 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 TNFRSF17Q02223 184 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 TRA2AQ13595 282 aaKnown RBP eCLIP4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 GAMTQ14353 236 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 IHHQ14623 411 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 DUSP5Q16690 384 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 SLC36A3Q495N2 470 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 AKIRIN2Q53H80 203 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ACTBL2Q562R1 376 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 AGAP6Q5VW22 663 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 SLC25A25Q6KCM7 469 aa4.18□□□□□ -1.74
CACNA1C-223ENST00000465278 ZCCHC12Q6PEW1 402 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms