RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 UBAP1Q9NZ09 502 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 TREM2Q9NZC2 230 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 CCDC59Q9P031 241 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 STX18Q9P2W9 335 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 ABCD2Q9UBJ2 740 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 B4GALT7Q9UBV7 327 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 KLK13Q9UKR3 277 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 YARS2Q9Y2Z4 477 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 V9GY05 133 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 DOT1LQ8TEK3 1739 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 NHSQ6T4R5 1651 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 MYH9P35579 1960 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 IGKV3D-15A0A087WSY6 115 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 A0A0G2JRQ6 117 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 A6NIZ1 184 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SLC19A2O60779 497 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ATP5HO75947 161 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SERPINA5P05154 406 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 CCDC166P0CW27 439 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 FOLR2P14207 255 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 HPGDP15428 266 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 NTSP30990 170 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SLC26A3P40879 764 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 TNFSF9P41273 254 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SLCO1A2P46721 670 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SSR4P51571 173 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 PLTPP55058 493 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 RAP1BP61224 184 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ATP6V0D1P61421 351 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 DR1Q01658 176 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ART3Q13508 389 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 COTL1Q14019 142 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 TRAM2Q15035 370 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 TIMM50Q3ZCQ8 353 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 C14orf177Q52M58 125 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 OR2B11Q5JQS5 317 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 KLF17Q5JT82 389 aaPredicted RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 MARCH8Q5T0T0 291 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 TIGD3Q6B0B8 471 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 DNM1P46Q6ZS02 220 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 PID1Q7Z2X4 250 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 CMC1Q7Z7K0 106 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ZNF440Q8IYI8 595 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ZBED8Q8IZ13 594 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 PUSL1Q8N0Z8 303 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 POM121L12Q8N7R1 296 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ZNF485Q8NCK3 441 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SDR42E1Q8WUS8 393 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 RASL10AQ92737 203 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SMARCD2Q92925 531 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 MRGPRFQ96AM1 343 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 OPTNQ96CV9 577 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 SLC25A38Q96DW6 304 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 DUS3LQ96G46 650 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 VSIG2Q96IQ7 327 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ARL5BQ96KC2 179 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 OR5B12Q96R08 314 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 FRMD8P1Q9BZ68 369 aaPredicted RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 TRIM15Q9C019 465 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 OR52A5Q9H2C5 316 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ACP6Q9NPH0 428 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 ZNF275Q9NSD4 429 aaPredicted RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 RPL26L1Q9UNX3 145 aaKnown RBP2.25□□□□□ -2.05
HPS3-203ENST00000460822 SNX24Q9Y343 169 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 FLVCR1Q9Y5Y0 555 aa2.25□□□□□ -2.05
HPS3-203ENST00000460822 COL24A1Q17RW2 1714 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ADGRA3Q8IWK6 1321 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 SLX4Q8IY92 1834 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TNS2Q63HR2 1409 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 COL4A1P02462 1669 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TNRC6CQ9HCJ0 1690 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 LOXHD1Q8IVV2 1947 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 PVALEFA0A1B0GWK0 134 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 RBMY1BA6NDE4 496 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 RBMY1EA6NEQ0 496 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 CENPXA8MT69 81 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ANKRD63C9JTQ0 380 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 RFXANKO14593 260 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 SLC9A3R1O14745 358 aaPredicted RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 SCAMP2O15127 329 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 ENTPD5O75356 428 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 KLK1P06870 262 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 RBMY1DP0C7P1 496 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 RBMY1A1P0DJD3 496 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 PRPS2P11908 318 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TAC1P20366 129 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 CXCR2P25025 360 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 GDF1P27539 372 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 OR1E1P30953 314 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 AQP2P41181 271 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TAF6P49848 677 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ACTA2P62736 377 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ACTG2P63267 376 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ACTC1P68032 377 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ACTA1P68133 377 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 ADARB1P78563 741 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 PRR4Q16378 134 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 TRMT5Q32P41 509 aaKnown RBP2.24□□□□□ -2.05
HPS3-203ENST00000460822 VAX1Q5SQQ9 334 aa2.24□□□□□ -2.05
HPS3-203ENST00000460822 C1orf94Q6P1W5 598 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms