RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 EFNB3Q15768 340 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 MOGQ16653 247 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 MEP1BQ16820 701 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 KRTAP27-1Q3LI81 207 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF691Q5VV52 312 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 HIST2H2BCQ6DN03 193 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 DRAM2Q6UX65 266 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 DPY19L4Q7Z388 723 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 DCXRQ7Z4W1 244 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 LINC00346Q8IVM7 164 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ENTHD1Q8IYW4 607 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 C8orf59Q8N0T1 100 aaPredicted RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 BBS1Q8NFJ9 593 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 OR5L1Q8NGL2 311 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ST7LQ8TDW4 575 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 FBLIM1Q8WUP2 373 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 RNF133Q8WVZ7 376 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ZNRF4Q8WWF5 429 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 CYGBQ8WWM9 190 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ITFG2Q969R8 447 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 MRPL48Q96GC5 212 aaKnown RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 MAP6Q96JE9 813 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 C4orf45Q96LM5 186 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 LURAP1Q96LR2 239 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF582Q96NG8 517 aaPredicted RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 UBTD1Q9HAC8 227 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 CA10Q9NS85 328 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 CGGBP1Q9UFW8 167 aaPredicted RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 LAMP5Q9UJQ1 280 aa7.52□□□□□ -1.21
COL28A1-205ENST00000453441 RPL36Q9Y3U8 105 aaKnown RBP7.52□□□□□ -1.21
COL28A1-205ENST00000453441 APCP25054 2843 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ITPR2Q14571 2701 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 NBPF19A0A087WUL8 3843 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 DSCAMO60469 2012 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 LOC100509620A0A075B734 347 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 B9A039 149 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 E7EQL1 145 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ZNF670-ZNF695F2Z2N8 137 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SELENOFO60613 162 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SMPD2O60906 423 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ABHD16AO95870 558 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SBK2P0C263 348 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 OR2T7P0C7T2 308 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 PRF1P14222 555 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 GABRB1P18505 474 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ALOX5APP20292 161 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CCNOP22674 350 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 DNASE1P24855 282 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 OTX1P32242 354 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 TTKP33981 857 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SERPINF1P36955 418 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 FABP6P51161 128 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CSNK2BP67870 215 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 IL5RAQ01344 420 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ROM1Q03395 351 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 HGFACQ04756 655 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 EGR3Q06889 387 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SPOCK1Q08629 439 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 RAB40BQ12829 278 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 MAD2L1BPQ15013 274 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 RGS7BPQ6MZT1 257 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CORO6Q6QEF8 472 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CFAP77Q6ZQR2 320 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 DTX2Q86UW9 622 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 MYPOPQ86VE0 399 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 MUC15Q8N387 334 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 OR2T27Q8NH04 317 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 LILRB1Q8NHL6 650 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 HAVCR2Q8TDQ0 301 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SMAP2Q8WU79 429 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 TMEM171Q8WVE6 324 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 NRG4Q8WWG1 115 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 TFAP2CQ92754 450 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 APOBEC3DQ96AK3 386 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 SLAMF6Q96DU3 332 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 KCNJ15Q99712 375 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 COPS4Q9BT78 406 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ABHD6Q9BV23 337 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 MROQ9BYG7 248 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CXorf56Q9H5V9 222 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 OPA3Q9H6K4 179 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ADGRL4Q9HBW9 690 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 PNRC2Q9NPJ4 139 aaKnown RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 INPP5EQ9NRR6 644 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CBLN4Q9NTU7 201 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 BEX4Q9NWD9 120 aaPredicted RBP7.51□□□□□ -1.21
COL28A1-205ENST00000453441 DNAJC27Q9NZQ0 273 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 CMAHPQ9Y471 501 aa7.51□□□□□ -1.21
COL28A1-205ENST00000453441 A0A1W2PPR1 153 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ACOD1A6NK06 481 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 M0R129 80 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 M0R135 149 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 ENTPD6O75354 484 aa7.5□□□□□ -1.21
COL28A1-205ENST00000453441 FADS2O95864 444 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms