RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ALKBH6Q3KRA9 238 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 AADACL4Q5VUY2 407 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 MBNL2Q5VZF2 373 aaKnown RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 CLEC2AQ6UVW9 174 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 SPATC1Q76KD6 591 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 SLC16A9Q7RTY1 509 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 BCDIN3DQ7Z5W3 292 aaKnown RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 ZNF283Q8N7M2 679 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 OR10S1Q8NGN2 331 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 OTOSQ8NHW6 89 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 TRUB1Q8WWH5 349 aaKnown RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 ZNF799Q96GE5 643 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 HRASLS5Q96KN8 279 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 SORCS2Q96PQ0 1159 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 ABHD6Q9BV23 337 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 TPK1Q9H3S4 243 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 C8orf4Q9NR00 106 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 PTTG3PQ9NZH4 202 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 MYEF2Q9P2K5 600 aaKnown RBP12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 LAMP5Q9UJQ1 280 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 STARD10Q9Y365 291 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 GMPPBQ9Y5P6 360 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 VPS13CQ709C8 3753 aa12.02□□□□□ -0.49
GTF3C3-206ENST00000448539 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 MED13LQ71F56 2210 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 CCDC182A6NF36 153 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 H0YHG0 523 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 TIMM8AO60220 97 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 F12P00748 615 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 APOC1P02654 83 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 MRPL3P09001 348 aaKnown RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 H2BFMP0C1H6 154 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 LIPAP38571 399 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 MPV17P39210 176 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 PRKXP51817 358 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 DSCR9P59020 149 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 ELF3P78545 371 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 LRRC36Q1X8D7 754 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 RSPO1Q2MKA7 263 aaPredicted RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 KRTAP27-1Q3LI81 207 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 DRAM2Q6UX65 266 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 ZCCHC24Q8N2G6 241 aaKnown RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 ZNF555Q8NEP9 628 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 RNF133Q8WVZ7 376 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 RFKQ969G6 155 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 CMBLQ96DG6 245 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 KCNJ15Q99712 375 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 RHNO1Q9BSD3 238 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 C1QTNF5Q9BXJ0 243 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 YIPF3Q9GZM5 350 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 DCLRE1BQ9H816 532 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 SP140LQ9H930 580 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 CYSLTR2Q9NS75 346 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 N6AMT1Q9Y5N5 214 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 TMEM14AQ9Y6G1 99 aa12.01□□□□□ -0.49
GTF3C3-206ENST00000448539 ARID1AO14497 2285 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 ZFHX3Q15911 3703 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 CSF3P09919 207 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 NAT2P11245 290 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 ATP6V1E1P36543 226 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 GGTLC2Q14390 218 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 CARTPTQ16568 116 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 ZMAT1Q5H9K5 638 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 COLCA1Q6ZS62 124 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 RHOUQ7L0Q8 258 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 KRT77Q7Z794 578 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 VCXQ9H320 206 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 POFUT1Q9H488 388 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 MYOZ1Q9NP98 299 aaPredicted RBP12□□□□□ -0.49
GTF3C3-206ENST00000448539 SMPD3Q9NY59 655 aaPredicted RBP12□□□□□ -0.49
GTF3C3-206ENST00000448539 DNAJC27Q9NZQ0 273 aa12□□□□□ -0.49
GTF3C3-206ENST00000448539 CGGBP1Q9UFW8 167 aaPredicted RBP12□□□□□ -0.49
GTF3C3-206ENST00000448539 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
GTF3C3-206ENST00000448539 NF1P21359 2839 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 LOC100130705A0A1B0GUX0 176 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 SNTNA6NMZ2 147 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 MPZL2O60487 215 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 ANXA2P07355 339 aaKnown RBP11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 CD99P14209 185 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 RAC2P15153 192 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 SELEP16581 610 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 PEX2P28328 305 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 HTR1FP30939 366 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 CX3CR1P49238 355 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 PDLIM4P50479 330 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 ZNF81P51508 661 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 POU4F2Q12837 409 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 PSG7Q13046 419 aa11.99□□□□□ -0.49
GTF3C3-206ENST00000448539 PCGF3Q3KNV8 242 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms